Corvus brachyrhynchos (American crow): 103621018
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Entry
103621018 CDS
T08418
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03013
Nucleocytoplasmic transport
cbrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103621018 (PNN)
03015 mRNA surveillance pathway
103621018 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103621018 (PNN)
03041 Spliceosome [BR:
cbrc03041
]
103621018 (PNN)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103621018 (PNN)
Spliceosome [BR:
cbrc03041
]
Complex C
Other components
EJC/TREX
103621018 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
103621018
NCBI-ProteinID:
XP_008637985
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MSGRAGSKALGAGQAPLTAPSVSFRPPQNRLLALTGPGGGRGRGSLLLRRGFSDSGGGPP
AKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATSKERTRRDLIQDQN
MDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLEVQAEEERKQVENE
RRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPA
TQKLMEESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEHQEVQNEEKKEEQNKEQ
EEGKVDQQVEEMETGNQHNDVEMEEVGEEKGKIGSGSGHSDAEKEQEEDEQKHDVEMKVE
EPTEVRENDKQQDGQHEEVTVVKEESENVQPVDNEQDVAEMNEAGSVERIENENGREIEP
ETECDVQPEKVCNVPSPKKEKGIKIENKAELEETQEKTPEAQTESVAEALSQPLSVPLAQ
SPQLSQSTQDTEPQADKDENAALSVKVVETQAEQNQTPSAESKSKTRSRSRGRAGNKTGH
NRSSSSSSSSTSSSTTSASSSSTGSSTSRSSSTSSSTTSGSTSRDSSSSSSSSSESRSRS
RGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSLRSDRKRSISESSR
SGKRTSRSERDRKSDRKDKRR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgggcgggcagcaaagccctgggggccgggcaggcgccactaacagcgcct
tccgtctctttcaggccccctcaaaacaggctgttagccctcacaggccccggtggaggt
agagggcgcgggagtttattgctaaggcgtggattctcagatagtggaggaggaccccca
gccaaacagagggatcttgaaggtgcatccagtaggctgggtggagaacgtcggacaaga
agagaatcacgccaagaaagcgacgcagaggatgatgatattaaaaagccggcgttgcca
tcttctgttgttgctacctccaaagagcgaacacgtcgagaccttatacaagaccaaaat
atggatgagaaaggaaaacaaaggaatcgacgtatatttggcttgttgatgggcactctt
cagaaatttaaacaggagtccacagttgctattgctactgagaggcaaaagagacgacaa
gaaattgaacaaaaacttgaagtgcaggcagaggaggagagaaagcaagttgaaaacgag
aggcgagaactgtttgaagaaagacgtgctaaacagacagagctgcggttattggagcaa
aaggttgagcttgctcagttgcaagaagaatggaatgaacataatgctaaaataattaaa
tacataagaacaaagacaaaacctcatttattctacatacctggcagaatgtgtcctgct
acgcagaagctgatggaagagtcacagaaaaagatgaatgcgctctttgaaagcaggaga
aatgaatttgcagagcagattaacaaaatggaggccaggcccagaagacaatctgtgaag
gaaaaagaacatcaggaggtgcagaatgaagaaaagaaggaagaacagaacaaggagcag
gaagagggtaaggtggatcagcaggtggaagagatggagacaggtaatcagcacaatgat
gtagaaatggaggaggtaggggaggaaaagggaaaaataggttcaggttcagggcatagt
gatgcagaaaaagaacaggaagaggatgaacagaaacatgatgtggagatgaaagtagaa
gagcctactgaggtgagggagaacgacaagcaacaggatggtcagcatgaggaggtcaca
gttgtaaaagaagaaagtgaaaatgttcagcccgtggataatgagcaagatgtggctgaa
atgaatgaggcaggtagtgtagaacgtatagaaaatgaaaatggcagagaaatagaacca
gaaacagagtgtgatgttcagccagaaaaagtgtgtaatgttccttctcccaagaaggag
aaaggtatcaaaatagaaaataaagctgaacttgaagaaacacaggagaaaacacctgaa
gctcagacagaatctgtggctgaggctctatctcagccactatctgtgccactagcacag
tcacctcagttgtctcagtccactcaggatacagagccccaggcagacaaggatgaaaat
gcagcgctatctgtaaaggtggttgaaacccaggcagagcagaatcagacaccaagtgca
gaaagcaagagtaagactaggagtagaagcaggggtagggcaggaaacaaaactggtcat
aaccgtagcagcagcagtagtagcagtagtacttcaagcagtactaccagtgcaagtagt
tccagtactggcagcagtaccagtcggagcagttccaccagcagcagcactacaagtgga
agtaccagcagggacagtagcagcagtagctctagcagtagtgaaagtagaagtcgaagc
cgaggaagaggacataacagagatagaaaacgcagaaggagcacagacaggaagcgaagg
gatgcttcaggagtagacagaagtcacaagtcctcaaaaggtggtagcagagataccaaa
agctcaaaggataaaagtttgaggtctgacagaaagagatctatatcagaaagtagtcgg
tcaggcaagagaacttcacggagtgaaagagaccgtaaatcagacaggaaagacaaaagg
cgttaa
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