Corvus brachyrhynchos (American crow): 103622066
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Entry
103622066 CDS
T08418
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103622066 (SNRNP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbrc03041
]
103622066 (SNRNP40)
Spliceosome [BR:
cbrc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103622066 (SNRNP40)
Complex C
U5 SnRNP specific factors
103622066 (SNRNP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
eIF2A
Cytochrom_D1
WDR54
WD40_like
PROPPIN
PD40
Motif
Other DBs
NCBI-GeneID:
103622066
NCBI-ProteinID:
XP_017599224
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MPGRAGHTLGSSLVPSPCPCVPQGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGNTLASA
GFDRLILLWNVYGDCDNFATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERV
KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDT
SDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDV
RPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLP
GHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcagggctggccacaccctgggctcgtccctcgtcccctcaccgtgtccgtgt
gtccctcagggccccccgcgctgctcctcgctgcaggcccccatcatgctgctgtcagga
cacgagggggaggtttattgctgcaagttccatcccaatggcaacaccctggcctcggct
ggcttcgacaggctcatcttgctctggaacgtctacggggactgcgacaacttcgccacg
ctgaagggacacagcggggccgtcatggagctgcactacaacacggatggcagcatgctc
ttctcagcatccacggacaaaaccgtggctgtgtgggacagcgagaccggcgagagggtg
aagaggctcaagggccacacgtccttcgtcaactcctgttacccggcccggaggggaccc
cagctcgtctgcaccggcagcgacgatggcaccgtcaagctgtgggatatcaggaaaaaa
gctgctgtccagacattccagaacacctaccaggtcctggctgtcaccttcaatgacacc
agtgaccagatcatctctggaggcatcgacaatgacatcaaggtgtgggacctgcggcag
aacaagctcacctacaccatgcggggccacgccgactccgtgacgggcctgagcctcagc
tccgagggctcctacctgctctccaacgccatggacaacacagttcggatctgggacgtg
aggcccttcgcccccaaggagagatgtgtgaagattttccaggggaatgtccataatttt
gagaagaaccttctgaggtgctcctggtccccagatggcagcaaaattgcaggggggtcg
gctgacaggtttgtgtacgtgtgggacaccacctccaggaggatcctctacaagctgccc
ggccacgccggctccgtgaacgaactggctttccaccccgaggaacccatcattctctcc
gcatccagtgacaaaaggctctacatgggggagatccagtga
DBGET
integrated database retrieval system
