Corvus brachyrhynchos (American crow): 103623003
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Entry
103623003 CDS
T08418
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103623003 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbrc04812
]
103623003 (SPTBN1)
Cytoskeleton proteins [BR:
cbrc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
103623003 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
103623003 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CENP-K
CAMSAP_CH
PH_11
Motif
Other DBs
NCBI-GeneID:
103623003
NCBI-ProteinID:
XP_008640261
LinkDB
All DBs
Position
Unknown
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEVLGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PETKAEEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKES
SPVPSPTSDRKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacggtagcgacagattacgacaacatcgaaatccaacagcagtacagcgac
gtcaacaaccgctgggatgtcgacgactgggacaatgagaacagttctgctcggctcttt
gagcgctcccgcatcaaggctttggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacttggctcgtgtgtcctgccgaattacagacctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaaccaaaggaaggatgcgcatccattgcctggagaacgtggataaagccctc
cagttcctgaaagagcaacgagtgcacctagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggactattatcctgagattccagatccaa
gatatcagcgttgaaactgaggacaataaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaacgtcaatatccacaactttacaaca
agctggagggatgggatggcgttcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacgtattaccactacttctccaagatg
aaagctttggctgttgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaaggg
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggcaaactcatctctgacattaataaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacattgcggcgtacgaggagcgggtccaggcc
gtggtggcggtggccaaggagctcgagactgaaaactaccatgacatcaaacgcatcact
gcgaggaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcggctcgagatgaaccttgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggatgaaatgaaggtgcttctgctgtcccaagactacggcaaacatttg
ttgggagttgaagacctgctgcagaaacatgctctggtggaagctgacattgctattcag
gctgagagagtgagaggagtcaatgcctctgctcagaagtttgccactgatggagaaggt
tacaagccctgcgacccgcaggtgatcagggaccgcgtggctcacatggagttctgctac
caggagctctgccagctcgcagccgagcgccgcgcacgcctcgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggaacagatc
ctgtcatctgatgactatgggaaggacctaaccagtgtcgtccgactcttgagtaaacac
aaggcgtttgaggacgagatgagtggccgcagcggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaagcggctg
gaggaagcctctctccttcaccagttccaggccgatgctgatgatattgatgcgtggatg
ttggacatcctcaagattgtctccagcaatgatgttggccacgatgaatattccactcag
tccttggtcaagaaacacaaagatgtggctgaggagattgcgagctaccggccgaccatc
gactctcttcacgagcaggccaaggccctgccacaggagcacgcggggtccccagatgtg
caaggcaggttgtccggaatcgaggagagatacaaagaggttgctgagctgacccggctg
cgtaaacaggccctgcaggataccctcgctctctataagatgttcagtgaggcagatgct
tgcgagctttggatcgacgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcgtcccgcgtggccgtggtgaaccagattgccaggcagctgatgcacagtggccac
cccggtgagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttcaga
gaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactaccat
cttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgattgaatccaca
caagacctgggtaacgacctggctggagtgatggccctgcagaggaagctgacgggcatg
gaacgggacctggtggccattgaagccaagctcagtgacctgcaaaaggaggcggagaag
ctggaatcagagcatcctgaccaggcacaagccatcctttcacggcttgcagagatcaat
gatgtgtgggaagaaatgaagaccaccctaaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaatcgcctccgaagatatgcccaacaccctgacagaggctgagaagctgctc
actcagcatgagaatatcaagaatgaaatcaacaactatgaggaagattatcagaagatg
agggacatgggtgagatggtgacgcaagggcaaactgatgctcagtacatgttcctacgc
cagcgcctccaagctttggacacgggatggaatgagctgcacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaagca
gaagctttccttaataaccaggagtatgttctggcgcacacggagatgccaactaccttg
gaaggagcagaagctgctattaaaaagcaggaggacttcatgaccaccatggatgccaat
gaggaaaagatcaatgcagttgtggagacaggcaggaggctcgttagtgatgggaacatt
aactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaaccgt
gaagcagccagtgaacttctgatgagactgaaagataacagggatctccaaaagtttctt
caggattgccaggagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctatgatgaggcaaggaacctgcacagcaagtggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggagggaatgcagctcatt
gcagagaaaccagagaccgaggccgtggtgaaggagaagctgacgggtctccaccaaatg
tgggacgagcttgaatccaccacccagaccaaggctcagcgtctctttgatgcaaacaag
gcagagctttttacccagagctgtgcagacctggataagtggctgaatggtttggagagc
caaatccagtcagatgactacggaaaagatctcaccagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaaagc
caggcaagggctttgagccaagagggcaagagcacagatgaagtcgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctagagcctttgaatgagagaaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtt
ggagagaggatgcccatagctacatctactgatcatggacacaacctccagactgtgcag
ctactaataaagaaaaatcagacccttcagaaagaaatccagggccaccagcctcgtatc
gatgacatcttcgagaggagtcagaacattatcacagagagcagccccaatgctgaagtc
attcagcagagacttgcagacttgaagcagctgtggaacctcctcatcgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgcagcc
gaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctatgcgggc
ctgaaggacctcgctgaggagaggaggggcaagctggacgagaggcaccggctgttccag
ctcaaccgcgaggtggacgacctggagcagtggatcgccgagagggaggtggtggcaggg
tcccacgagctgggccaggactacgaacacgtcacaatgctgcaggagcggttccgggaa
ttcgcccgggacaccgggaacatcgggcaggagcgggtggatactgtcaaccacatggcg
gatgaactcatcaactccggccattcggacgctgccacgatcgccgagtggaaggacgga
ctcaatgaggcctgggcagatctcctggagctcattgacacgagaacacagatccttgca
gcctcttatgaactgcacaaattttaccacgatgccaaggaggtcttaggacgtatccaa
gacaaacataagaaactgcccgaggagcttggtagagaccaaaacacagtggaaacacta
cagagaatgcacacgacatttgagcacgatatccaggccctgggcacccaggtgcgacag
ctgcaggaggatgcagcgcgcctccaggctgcctacgctggggacaaggccgatgacatc
cagaagagggaaaacgaggtcctggaggcatggaaggcactgctggatgcctgtgagggc
cgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgggat
ctcatgctctggatggaagacgttatccggcagatagaagcccaggaaaagccaagggac
gtttcatccgtggaactcctcatgaacaatcaccaggggatcaaagcggaaattgatgcc
cgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaacac
tacgcatctgaggagatcaaggaaaagctcctgcagctgaccgaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccagttc
tccagagatgcaagcgtggctgaggcctggctgctgggccaggagccctacctgtccagc
cgtgaaatagggcagagcgtcgatgaggtggaaaaattaatcaagcggcacgaagcgttt
gagaaatccgcagctacctgggacgagaggtttgcagcgctggaaagactgaccacgctg
gaactgctggaagtccgtcggcagcaagaagaggaggagcggaagaggcagccgcccact
ccggagaccaaggctgaagaggatggagactcccagcagcaatgggatgggacaaaagga
gaacaggtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaaacc
gcagaaaccaatgaaatggtcaatggagctgcagaacagaggacgagttccaaagagtcc
agtcccgttccttccccgacatcagaccgcaaagccaagagcggcgttcaggcccagact
gctgctaccctcccagccaaaacccaggagatcccctcagcccagatggagggcttctta
caccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtcatggcataac
gtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcaaaagctgctgct
tctggcatcccctaccacaacgagatccccgtcagcttaaaggacgcagtctgcgaagta
gcggtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaacgaa
tacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcacatca
gcgatctcttcggacaaaatcgaagtgtccccgaccacccagagcactccagcctccagc
cgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccctggcaagcgg
gagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
