Cupriavidus basilensis: RR42_m2873
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Entry
RR42_m2873 CDS
T03642
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbw03009
]
RR42_m2873
Enzymes [BR:
cbw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
RR42_m2873
Ribosome biogenesis [BR:
cbw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RR42_m2873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
Motif
Other DBs
NCBI-ProteinID:
AJG20247
UniProt:
A0A0C4Y4H8
LinkDB
All DBs
Position
main:complement(3042572..3043573)
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AA seq
333 aa
AA seq
DB search
MNELRHQIEKEVRPAAAGPQVAYVTIGDEADGQRIDNFLLKLSKGVPKSHVYRILRSGEV
RVNKGRVDATYRLQLGDVVRIPPMRVAASAPDAGKFVPPASFPVVFEDEYLLVINKPAGV
AVHGGSGVAFGVIEQLRRARPQARFLELVHRLDRETSGLLVLAKKRTALVNLHEQMRGSA
LDKRYFACVAGHFENARQHVKFPLYKYTTPEGERRVRVQEDGIASHTVFNRLEVMPGYTL
LEAELKTGRTHQIRVHLAHSGFPILGDEKYGDYALNKALARSGANPGLKRMFLHAHSLTF
THPISGEITTVVAPMPPECEAFLQQARNQRAAD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttacgccatcaaattgaaaaagaggtgcggcccgccgcggccgggccccag
gtggcgtatgtaacgattggcgacgaagccgatggccagcgtatcgacaacttcctcctg
aagctctcgaaaggggtgcccaagagccatgtctaccgcatcctgaggtcgggcgaagtg
cgtgtgaacaaggggcgggtcgacgccacctatcgtctgcagttgggcgacgtggtacgg
attccgccaatgcgtgtggcggcttcggcacctgatgccggcaagttcgtgccgccggcc
agttttccggtggtcttcgaggatgaatacctgctggtgatcaacaagcctgccggcgtg
gccgtgcatggcggctccggcgtggcattcggcgtgatcgagcaattgcggcgcgcccgc
ccgcaggccaggttccttgagctggtgcaccgtctcgaccgcgagacctccggcctgctg
gtgctggcgaagaagcgtacggcgctggtgaacctgcatgagcagatgcgcggcagtgcg
ctggacaagcgctacttcgcctgcgtggctggacatttcgagaatgcccggcagcacgtg
aaattcccgctatataagtacaccaccccggaaggcgagcgccgtgtgcgggtgcaggaa
gatggcattgcctcgcataccgtgttcaaccggctcgaggtcatgccaggctacaccttg
ctcgaggccgagctgaagacagggcggacccaccagatccgggtccacctggcgcattcc
ggcttcccgatcctgggtgacgaaaagtacggcgattacgccctcaacaaggcgctggcc
cgcagcggcgccaatcctgggctcaagcgcatgttcctgcacgcgcacagcctgacattc
acgcatccgataagtggggaaatcaccactgtcgttgcacccatgccgccggagtgcgaa
gcgttcctgcagcaagcccgtaaccagcgcgccgctgactaa
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