Cupriavidus basilensis: RR42_s2922
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Entry
RR42_s2922 CDS
T03642
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
KO
K11527
two-component system, sensor histidine kinase and response regulator [EC:
2.7.13.3
]
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cbw01001
]
RR42_s2922
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cbw02022
]
RR42_s2922
Enzymes [BR:
cbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RR42_s2922
Protein kinases [BR:
cbw01001
]
Histidine kinases
Other
RR42_s2922
Two-component system [BR:
cbw02022
]
Other families
Unclassified
RR42_s2922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
PAS_4
Hpt
PAS_8
dCache_1
TGT_C1
Motif
Other DBs
NCBI-ProteinID:
AJG24503
UniProt:
A0A0C4YN84
LinkDB
All DBs
Position
secondary:complement(3232118..3235090)
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AA seq
990 aa
AA seq
DB search
MDLNQAMGEDSAGRVGSIAENPALKKLVKRILADPGRADLRAEFDQWILPIYRSRGFDGY
ALIHPDHTILAASSPRYVNASDLTEQTIRTLREAQALGFAISRPTVSTLPLMAQGVEQPA
GMFYQVACARIDVDGGAAGFLCLRVDPYVRLFKILKAGRIGETGEAYVIDSAARIISPTR
DSARDAPPDRTRQDDSPVPWGILPGERPAADLLVQGRTGYAPTKLAQQLLTDKVKEAVDA
EGYDGYGGHKVIGASRWLADQDMGLVVELQVDEAYQSYFLVRRAIASLAAIAIGLILALA
AFQWRARRGAIESEERIRAFRENLPTGLAYKNIEGVGIMANQAYEQAIGVPRGAFVGCCD
WDVIPNRHIAQISRDMHELVVASGTSQNQVHTISPRYGYERVFRMVTFPVRGPDDAGIIG
VGTVAADITEQERTRQALEALTNTLEARVEERTLQLTAAREAAESAARVKAQFLANMSHE
IRTPLNAIIGMSHLALSRERADKLDRYLTRIGASAGHLLGIVNDILDFSKIEAEKLTIDA
REFYLSELLDRVTGLFWETAEAKGITMSIFTSPAIPLRLVGDPLRVGQILINFLGNALKF
TDRGEVCLRVRETLVRDSHIGLCFEVEDTGVGIAQEALAELFTPFQQLDSAMNRRFEGTG
LGLVISKKLAELMGGRVFARSQAGVGSIFSFEVSLGIACADRAAAPGSALSRMAVAPSDC
HSLAGPAWEALRGRRVLLVEDNPINQEVARDLLELAGMDVQVAGDGQRALVALKENAFDI
VLMDIHMPGMDGIETTGAIRHALGLHALPVLALTADAMSADRIRCIEGGMNDHISKPIDA
QAMFRTIAAWLPPVAVPSGAARGPAGAGTAVTQALKRVPGLDAAAGIKLLFGREDIYINL
AKRVCAERADVVTQIHAAIGAGDFGQASLHAHGLRAVLGMLGAAELAQACSVLDRGLQDD
RADAVALATLARDFPALIANLRSACAVGAV
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
ttggacctgaaccaggcgatgggcgaggattctgcggggcgagtcgggagcatcgccgag
aaccctgccctgaaaaagctggtgaaacgtatcctggccgatcccggccgggccgatttg
cgggctgaattcgaccagtggatcctgccgatctacaggagccggggcttcgacggctat
gccctgatccacccggaccataccattctcgcggcgagcagcccgcgctatgtcaacgcc
tcggacctgaccgagcagaccatacggacgttgcgcgaggcgcaggcgcttggatttgcc
atttcgcggcccactgtctcgacgctgccgctcatggcacagggcgttgaacagccggcc
gggatgttctatcaggttgcctgcgcgcgcatcgatgtggatggaggggccgctggcttc
ctgtgcctgcgtgtcgatccctacgtgaggctgttcaagattctcaaggcgggccggata
ggcgaaacgggcgaggcttacgtgatcgattccgccgcacgcattatctccccgacccgc
gactcggcgcgcgatgcgccgcctgatcgtacgcggcaggacgactccccggtgccgtgg
gggattttgcccggcgagcggccggcggccgatttgctggtgcagggccgtactggctat
gccccgacaaaacttgcgcagcaactgctgacggataaagtcaaggaggcggtggacgcc
gagggttatgacggctatggcggacacaaggtcatcggggctagccgatggctggctgac
caggatatggggctggtggtcgagctgcaggtggacgaagcctatcagtcgtatttcctg
gtccgcagggcgatcgccagccttgccgcgatcgcgatcgggctgatccttgcgctggcg
gcattccagtggcgcgcgcgccgcggcgcgatcgagagcgaggagcgcatacgcgcattc
cgcgagaacctgccgaccgggctggcctacaagaacatcgagggtgtgggcatcatggcc
aatcaagcttacgagcaagccatcggggtgccgcgcggcgctttcgtgggatgctgcgac
tgggacgtcatcccgaatcgccatatcgcgcagatcagccgcgatatgcacgaactggtc
gtggccagcggaacatcccagaaccaggtgcatacgatcagtcctcgctatgggtatgaa
cgtgtcttccgcatggtcacgttcccggtgcgcgggccggacgatgcgggcatcatcggc
gtcggtaccgtggccgccgatatcactgagcaggagcgcacaaggcaggcgctggaggcg
cttaccaacacgctggaagcacgcgtcgaagagcgaacgctacagctgacggcggcccgc
gaggcggctgaatcggctgcgcgcgtcaaggcacagttcctggccaacatgagccacgag
atcaggacgccgctcaatgccatcatcggcatgtcgcatctggcgctgagccgcgagcgc
gcggacaagctggatcgctatctgacgcgcatcggtgcatccgccgggcacttgctgggg
atcgtcaacgatatcctggatttctcgaagatcgaggcggaaaagctgaccatcgacgcg
cgcgaattctacctgtctgaactgctggaccgtgttacgggactgttctgggaaacggcg
gaagcgaagggcatcacgatgtccatcttcacatcccccgcgattccgcttcggctggtc
ggcgatccgctgcgtgtcgggcagatcctgatcaatttcctgggcaatgcgctgaagttc
acggatcgtggcgaggtctgcctgcgagtcagggagacgctcgtgcgcgacagccatatc
ggcttgtgtttcgaggtcgaggacacgggcgtaggcattgctcaggaagcattggcggag
ctattcacgccgttccagcaattggacagcgcgatgaaccgccgctttgaaggcacgggg
cttgggcttgtgatcagcaagaagctggcggaactcatgggtgggcgcgtcttcgcgcgg
agccaggctggtgtcggaagcatcttctcgttcgaggtgtcgctggggattgcgtgcgcg
gaccgggcggccgctccgggctccgcgctttcgcgtatggctgtggcgccatcggattgc
cactcgctcgccgggccggcgtgggaggcattgcgcgggcgcagggtcttgctggtcgag
gacaatccgatcaatcaggaggtcgcgcgcgatcttctcgagctggcgggcatggacgtg
caagttgccggcgacggccagcgggcgctggtggcgctcaaggaaaacgcattcgatatc
gtgctgatggacatccatatgccgggcatggacggtatagagaccaccggcgcgattcgc
cacgccctgggccttcatgccctgccggtgctggcgctgacggcggacgcgatgtcggcg
gaccgcattcgctgcatcgagggcgggatgaacgatcacatctcaaagccgatcgacgca
caggcaatgtttcgcaccatcgcggcatggctaccgcccgtcgccgtgccatcgggcgcg
gctcgcggcccggcaggagcggggacggcggtgacgcaggccctgaagcgagtaccgggc
ctggatgccgccgcggggatcaaactcttgttcggccgcgaggatatctacatcaatctg
gccaagcgcgtctgcgccgagcgcgcggacgtggtaacgcagatccatgcggccatcggg
gccggcgactttggccaggcaagcctgcatgcccatggcctgagggccgtgctcggcatg
cttggggcggctgagctcgcgcaggcatgttcggtgctggaccgtggcttgcaggatgac
cgggcggatgccgtggcgctcgccacgctggcccgggactttccggcgctgatcgccaac
ctgcgctcggcgtgcgccgtgggcgcggtgtaa
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