Clostridium beijerinckii ATCC 35702: Cbs_0219
Help
Entry
Cbs_0219 CDS
T03415
Name
(GenBank) sigma-54 factor interaction domain-containing protein
Organism
cbz
Clostridium beijerinckii ATCC 35702
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PTS_EIIA_2
EIIA-man
PRD
AAA_5
AAA_2
AAA
RuvB_N
Sigma54_DBD
Mg_chelatase
AAA_22
AAA_14
Sigma54_activ_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
AIU03831
LinkDB
All DBs
Position
249021..251945
Genome browser
AA seq
974 aa
AA seq
DB search
MQRLIELINSEDKKNPYTDQELAEFLSIPRLKVIQKRNELNIPDSRDRRKELLLADLREI
LKKNINLSERKVTELMMERGYNISRSIISKNIKDVIQEIKGGNESTLPNETLVIKEKDNN
KNEESFQKLIGYRGSLRNKIDLAKAAILYPPNGLHTLIYGGSGVGKSELAECMYEFSVLS
GVKSKDAPFIVFNCADYAENPNLLIAQLFGVIKGAYTGANSDKEGLVEKANGGILFLDEI
HRLPSEGQEILFYLIDKGKYRRLGETNVERKVNVLILAATTENPESNLLLTFRRRIPVLI
ELPKLTERPLSERLEVIVMFLTREARRINRNLLVKKDVLTCLMMYNCKANIGQLKSDIQV
ICAKSYVKYMFKNTDEVVIDIEDLSLSIKSALSEGQKEKKQVKNLGIDDLYIDIKNEQKN
KDEIYKYVNENEIYHYIEEQFKKLELEGIKNEEMDEILLEKVENKLGKIIDNKKITKLLN
INELKTIVRPEVINITEGILELVREKYKFINNSFFIALAIHINFTIERVMNGKVITKSNI
HMEKATMVQEMKIAEKIRIMIEKSTKLKIPKEETTYIAIYIKKFCSDVFNVKPKVRVIII
THGHVACGIADIVNQLLGVEDTVGIEIALDESPESGIERTIELVQEIDEGRGCLLLVDMG
SLGMFSTIVEERTGIKTMSLARVDTLLALEAVRKASIEGASLEDIVEMLKEVKEYNGTFK
SEIAGKKNKKKAIITVCLTGEGNSLSIKKYLESHLKTANHSIEIFAMGLIREKDVEAEIT
KMSSEYDIVAVCGTIKVNIANIPFIDYDSILNGSGINRLIKLMEIQFDNKEMLVYERLNK
LIYEEFILLNLDCVFKEEVIDKMAELLEEKGFVNNKFMLNLYKREAMGNSVFNKEVAIPH
GLPENIIRPAIVIAKLNKPIQWDNETAVDIVFMLALKEDNREEIKKLFYMVREKNLVNNV
RIAQSEKEVKKLFS
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagattaatagaacttattaatagtgaggataaaaagaatccttataccgatcaa
gaacttgcagaattcttatctataccaaggctaaaagtaatacaaaaaagaaatgaacta
aatattccagattctagggatagaagaaaagaactgctattagcagatctaagagaaata
ttgaaaaaaaatataaatttatcggaacgaaaagtaacagaactaatgatggagagaggc
tataatatttcacgtagtattataagtaaaaatattaaagacgttattcaagagatcaaa
gggggaaatgagtctacacttccaaatgaaactctagtgattaaagaaaaagataataat
aaaaatgaggaaagctttcaaaaacttataggatatagagggagtcttagaaataagata
gacctagcaaaagcggctatattatatccaccgaatggacttcacaccttaatttatggg
ggctctggagttgggaaaagtgagttggcggaatgtatgtatgagttttctgtattaagt
ggagtaaagtctaaagatgcccctttcatagtatttaattgcgcagactatgcagaaaat
ccaaatttgctcatagcccagttgtttggagtaattaaaggcgcatatactggggctaat
tcagataaagaaggattagttgaaaaagcaaatgggggaattttatttttagatgaaatt
catagacttccatcggaagggcaagagatattgttttatcttatagataaaggaaagtat
agaaggttaggtgaaactaatgttgaacgaaaagtaaacgttcttatactggcggcgact
acagaaaacccagaatctaatctactattgacttttagaagaaggatacctgtacttatt
gaattacctaaattaacggaaagaccgttatctgaaagattagaggtcatagtaatgttt
ttaacaagagaggccagaagaattaatagaaatctattggttaaaaaggatgtattaacg
tgcttgatgatgtataactgtaaagctaatataggtcaattaaagagcgatattcaagtt
atatgtgcgaagagttatgtaaaatatatgtttaagaatacagatgaagttgttatagat
atagaagatttgagtctttcaatcaagagtgcactttcagaaggccagaaagagaagaag
caagttaaaaatcttggaatagatgacttatatatagatataaagaatgaacaaaaaaat
aaagatgaaatatacaaatatgtaaacgaaaacgagatatatcactatatagaggaacaa
tttaagaagcttgaattagaaggaataaaaaatgaagagatggatgaaattcttttagaa
aaagttgagaataagttaggtaaaattattgataataaaaagataactaaacttttaaat
attaatgagttaaaaacaatagtaagaccagaagttataaacataacagaaggaattctt
gaattagtgagggaaaaatacaaatttataaataatagtttttttattgccttagcaatc
catattaattttacaattgaaagagtaatgaatggaaaagttataacaaaatcaaatatt
catatggaaaaggcaaccatggtacaagaaatgaaaattgcagagaaaatcagaataatg
atagaaaaatccacaaagttaaaaattccgaaggaagaaacaacgtatatagcaatttat
ataaagaaattctgttcagatgtgtttaatgtaaaaccaaaggttagagtaatcataata
actcatggacatgtagcctgtggaattgcagacattgttaatcaattgttgggggtggaa
gatacagttgggatagaaatagctttagatgaatctccagaaagcggtatagaaagaact
attgagttagttcaggaaatagacgaaggacggggatgtttactacttgtagatatgggg
tcattgggaatgttctcaacaatagtggaagagaggactggaatcaaaactatgagtcta
gctagagttgacacgttattggcattagaagctgttagaaaagcctctatagagggagca
agcttggaagatatagttgaaatgctaaaggaagttaaagaatataatggtacgtttaag
tcagaaatagcaggtaaaaagaataagaaaaaagcaataataactgtttgtttgactggg
gaaggaaactcgctaagtataaagaaataccttgaaagtcatctgaaaacagctaaccat
agtatagaaatttttgcaatggggcttattcgtgaaaaagatgtggaggctgaaattact
aagatgtcaagtgaatacgatattgtggcagtatgcggaacaataaaagtaaatattgca
aacataccatttatagattatgacagtatattaaatggaagtggaattaatagattaatc
aagcttatggagatacagtttgataataaggaaatgttagtttatgagaggctaaacaag
ctaatatatgaagaatttattttattaaacttagactgtgtatttaaagaagaagttata
gataaaatggcagagttacttgaagaaaagggatttgtaaataataagtttatgttaaat
ctatataaaagagaagcaatgggaaatagtgtgtttaataaagaggtagctattccccat
ggacttcctgaaaatataattagaccagctatagttatagcaaaactaaataaaccaatc
caatgggataacgaaacagcggtagatatagtttttatgttggcacttaaagaagacaat
agagaagagataaaaaaattgttttatatggttagagaaaaaaacttagtaaacaacgtg
cgtatagctcaatctgaaaaagaggtaaagaaattgttttcataa
DBGET
integrated database retrieval system
