Cervus canadensis (wapiti): 122426209
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Entry
122426209 CDS
T07554
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03013
Nucleocytoplasmic transport
ccad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122426209 (SRRM1)
03015 mRNA surveillance pathway
122426209 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122426209 (SRRM1)
03041 Spliceosome [BR:
ccad03041
]
122426209 (SRRM1)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122426209 (SRRM1)
Spliceosome [BR:
ccad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
122426209 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
122426209
NCBI-ProteinID:
XP_043300880
LinkDB
All DBs
Position
24:7586602..7616058
Genome browser
AA seq
917 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKTEPVLEPKEPSPEKNSKKEKEKEKTRPRSRTRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKEA
SPRMQMGKRWQSPMTKSGRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSAREARSPQPNKRHSPSPRPRAPQTSSPPPLRRGASSS
PQRRQSPSPSSRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP
PSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHKK
HKKHKKEKAVAAAAAAAVTPAAVAAPTATSAQEEPEPEPEPKKETESEAEDNLDDLEKHL
REKALRSMRKAQVSPQS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaattcgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacagaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattcgaaaatgatgcaaatcaacctgaccgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctactcctaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactgaagaaggaagaaataaaacagagacagattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaagaagaaaaagaa
agcagcagagaaaaaagggagcggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaaaagccggagtccttcccctgctccagagaagaaggaaaaaact
ccagagctcccggagccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaagactgaaccagtactagaacctaaagaaccttct
ccggagaaaaactccaaaaaggaaaaggaaaaggagaagacccgaccaagatctcggaca
cgttcgaagtcaagatcccggacacgttctcgctctccttctcatactagaccaagaagg
cgccatagatctcgatcaagatcatactcgcctaggaggcggccaagcccaagaagacga
ccctctcctcgaagaagaaccccaccgagacgaatgcctcctcccccaaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcagcatccttgtctgggagtagttca
tcatcatcttcgtctcgttcccggtcaccgccaaagaaacctccgaagaggacatccagc
cctcctcgaaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcatagg
ccatcacctccagctactccgccaccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaaggaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgaca
aaacataaaggtactgagaaaagagaatccccttcaccagcaccgaagcctcggaaagta
gagttgtctgaatcagaagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgccaatatagacgacagaaccagcagtcttcatctgattctggctcctcctct
tcctcagaagatgaacgacccaaaaggtcccatgtgaagaatggtgaggtaggcaggcga
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagaggct
tcccctcggatgcagatgggaaagcgatggcaatcgccaatgactaaaagtggtagacgg
aggagaagtccctccccaccgcccgccagaaggcgacgttctccttctcctgctcctccg
cctcgtcgacgcaggtctcccacaccaccaccacggcggaggactccgtctcctcctcca
cgtcgtcgctcaccttccccaagaagatactctcctccaatacagaggagatactctcct
tctccgcctccaaagagaagaacggcttcaccccctccccctcctaaacgaagggcatca
ccatctccaccaccaaagcgtcgggtctcccattcaccacctcccaaacagagaagctcc
ccagtcaccaagagacgttcgccttcattgtcatcaaagcataggaaagggtcttccccg
agccgatctgcccgggaggcccggtcaccacagccaaacaaacggcactcaccctcacca
cgtcctcgcgctcctcagacctcaagtcctccacctcttcgaagaggagcatcatcgtca
ccccaaagaaggcagtccccatctccaagctctaggcccattaggagagtctccaggact
ccggaacccaaaaagataaaaaaagctgcctcaccaagccctcagtcggtaaggagggtc
tcatcttcccgatctgtctcgggatctcctgagccagcagctaaaaagcccccagcacct
ccatcacctgtccagtctcagtcaccctccaccaactggtcaccagcggtaccggttaaa
aaggctaaaagcccaacaccaagcccatcaccggcaaggaattcagacccagaaggaggt
ggaaagaaaaagaagaagaagaaggacaagaaacacaaaaaggataagaagcacaagaag
cacaaaaaacacaagaaggagaaggccgtagctgctgcggctgcagccgccgtgacccct
gcggccgtggctgctcccacggccacgtcagcacaggaggagccggagccagagcccgag
cccaagaaggagactgaaagtgaggctgaagataaccttgatgacttagaaaagcacctg
cgtgaaaaggccctgagatcaatgcggaaggctcaagtgtccccacagtcctag
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