Cervus canadensis (wapiti): 122426784
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Entry
122426784 CDS
T07554
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122426784 (PUM1)
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Gene cluster
GFIT
Motif
Pfam:
PUF
Motif
Other DBs
NCBI-GeneID:
122426784
NCBI-ProteinID:
XP_043301859
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Position
24:complement(13062445..13185339)
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AA seq
1193 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGVF
SAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPPQYYGVTPWGVYPASLFQ
QQAAAAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQADPLVAAAAVNS
ALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQ
AAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNNLASSSFYGNNSLSSSS
QSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSD
LYKRTSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLG
GLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLED
FRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVD
VFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEM
VRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI
LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS
QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE
PAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacggtcggagagtgggggactaggcgttagc
atggtggagtatgtattgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtgcagaatgggattgacgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggtttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaagacccaatgcgcttgctgtccagcagttgaca
gccgctcagcagcagcagtatgcgctagcagccgcgcatcaaccccacatcggtgtgttt
tcagcaggtttagctcccgctgccttcgtccccaacccgtacatcatcagcgctgcgccc
ccagggaccgacccctacacagctggattggctgcagcggcgacactcggcccggctgtg
gtccctccccagtattacggagttactccctggggagtctaccctgccagtcttttccag
cagcaagccgccgccgctgctgcagcaacaaattctgctaatcagcagaccaccccacag
gctcagcaagggcagcagcaggttctccgtggaggagccagccagcgtcctttgacccca
aatcagaaccagcagggacagcaagctgatccgctagtggcagctgcagcagtgaattct
gcccttgcatttggacaaggactggctgcaggcatgccaggttatccagtcttggctccc
gctgcttactatgaccaaaccggtgcccttgtggtgaatgcaggagcgagaaatggtctt
ggagcccctgttcgactcgtagctcctgccccagtcattattagctcctcagctgcacaa
gcagctgttgcagcggccgcagcttcagcaaatggagcagccggtggtcttgctggaaca
acaaacggaccatttcgccctttaggaactcagcagccgcagccccagccccagcagcag
cccagtaacaacctggcatccagctctttctacggcaacaactctctgagcagcagttcg
cagagcagctccctcttctcccagggctctgcccagcctgccaacacatccctggggttc
ggaagtagcagttctctcggcgccaccctgggatcagcccttggagggtttggaacagca
gttgcaaactccaacactggcagtggctcccgccgtgactccctgactggcagcagtgac
ctttataagaggacatcgagcagcctgacccccattggacacagtttttataacggcctt
agcttttcctcctctcctggacccgtgggcatgcctctccctagtcagggaccaggacat
tcacagacaccacctccttccctctcttcacatggatcctcttcaagcttaaacctggga
ggactcacaaatggcagtggaagatacatctctgctgctccaggcgctgaagccaagtac
cgcagcgcgagcagtgcctccagcctcttcagccccagcagcacccttttttcctcctcc
cgtttgcgatacggaatgtctgatgtcatgccctctggcaggagcaggcttttggaagat
tttcgaaataaccgatatcccaatttacaattgcgggagattgctgggcacataatggag
ttttcccaagaccagcatggttccagattcattcagctgaaacttgagcgtgccacacca
gccgaacgccaacttgtcttcaatgaaatcctgcaggccgcttaccagctgatggtggat
gtatttggaaattatgtcattcagaagttctttgaatttggcagccttgaacagaagctg
gctttggctgaacggattcgaggccacgtcctgtcattggcactgcagatgtatggctgc
cgtgttatccagaaagctcttgagtttattccctcagaccagcaggtaattaatgaaatg
gttcgggaactggatggccatgtcctcaagtgtgtgaaagaccagaatggcaatcacgtg
gtgcagaagtgcatcgagtgtgtgcagccccagtctctgcagtttatcatcgatgcattt
aaggggcaggtgtttgctttgtccacgcatccttatggctgccgagtgattcagaggatc
ctggagcactgtctccctgaccagacactccctattttagaggagcttcaccagcacacc
gagcaacttgtacaggatcagtatggaaattatgtaatccagcatgtattggagcatggt
cgtcctgaggataaaagtaaaattgtagcagaaattcgaggcaatgtacttgtgttgagt
cagcacaaatttgcaagcaacgtcgtggagaagtgtgtcactcacgcctcccgtacagag
cgcgctgtgcttatcgacgaggtgtgcaccatgaacgacggtccccacagtgccttatac
accatgatgaaggaccagtacgccaactacgtggtccagaagatgatcgatgtggcggag
ccagcccagaggaagatcgtcatgcacaagatccggccccacatcgcgactcttcgcaag
tacacttatggcaagcacatcctggccaagctggagaaatactacatgaagaatggcgtt
gacttagggcccatctgtggcccccctaacggtattatctga
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