Cervus canadensis (wapiti): 122447621 Help Entry 122447621         CDS       T07554                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism ccad  Cervus canadensis (wapiti) Pathway ccad04151   PI3K-Akt signaling pathway ccad04510   Focal adhesion ccad04512   ECM-receptor interaction ccad04820   Cytoskeleton in muscle cells ccad04926   Relaxin signaling pathway ccad04933   AGE-RAGE signaling pathway in diabetic complications ccad04974   Protein digestion and absorption ccad05146   Amoebiasis ccad05165   Human papillomavirus infection ccad05200   Pathways in cancer ccad05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:ccad00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     122447621 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122447621 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     122447621 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     122447621 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     122447621 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     122447621 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     122447621 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     122447621 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     122447621 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     122447621 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     122447621 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ccad04147]     122447621 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:ccad00536]     122447621 (COL4A1) Exosome [BR:ccad04147]  Exosomal proteins   Exosomal proteins of other cancer cells    122447621 (COL4A1) Glycosaminoglycan binding proteins [BR:ccad00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122447621 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  122447621 NCBI-ProteinID:  XP_043334260 LinkDB All DBs Position 9:2207354..2340740 Genome browser AA seq 1668 aa AA seqDB search MGPRLGVWLLLLAALLLHEESSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVIG FPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPLGVPGYPGNPGLPGIPGQDGPPGPLG IPGCNGTKGERGPVGPPGLPGFAGNPGPPGLPGMKGDPGEILGYIPGTLLVGERGFPGQP GAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVSGPPG LPGQAQVITKGDTAMRGEKGQKGEPGFQGMPGIGEKGEPGKPGPRGKPGKDGEKGEKGSP GFPGDSGYPGQPGREGLKGQKGEAGPPGLPGTVIGTGPLGEKGEPGYPGGPGAKGETGPK GFPGIPGQPGPPGFPTPGLIGAPGFPGDRGEKGEPGLPGVSLPGPSGRDGLPGPPGPPGP PGQPGHTNGIVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGDSCLICDTTELRGPPGP QGPPGEIGFPGQPGAKGDRGLPGRDGLEGVPGPQGSPGLMGQPGAKGEPGEIYFDIRLKG DKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDIG PPGPPGFGPIGPIGDKGQMGFPGNPGAPGQPGPKGEAGKVVPLPGPPGAEGLPGSPGFQG PQGDRGFPGSPGRPGLPGEKGAIGQPGIGFPGPPGPKGVDGLPGDAGPPGNPGRQGFNGL PGNPGPPGQKGEPGIGLPGLKGLPGIPGIPGTPGEKGNVGGPGVPGEHGAIGPPGLQGLR GDPGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPGP KGDKGSQGLPGLTGQSGLPGLPGQQGTPGQPGFPGPKGEMGVMGTPGQPGSPGPAGVPGL PGAKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGEKGDQGEKGQTGP TGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVSGIPGAPGLPGPKGSTGGMGLPGM PGPKGVAGIPGPQGIPGLPGDKGAKGEKGQAGLPGIGIPGRPGDKGDQGLSGFPGSPGEK GEKGSTGIPGMPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGIKGEAGLPGKP GPTGPAGQKGEPGSDGIPGSVGEKGEPGLPGRGLPGFPGSKGEKGSKGDVGFPGLAGSPG IPGSKGEQGFMGPPGPQGQPGLPGTPGHAVEGPKGDRGPQGQPGLPGHPGPMGPPGLPGL DGLKGDKGNPGWPGTPGAPGPKGDPGFQGMPGIGGSPGITGAKGDMGLPGVPGFQGQKGL PGLQGVKGDQGDQGFPGTKGLPGPPGPPGPFDIIKGEPGLPGPEGPAGLKGLQGPPGPKG QQGVTGSVGLPGPPGEPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPS VDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMP FLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVMAVH SQTIQIPQCPTGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGT CNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5007 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtctggctgctgctgctcgccgcgctcctgctccacgaggag agcagccgggccgccgcgaagggtgggtgtgccggctctggctgcgggaagtgtgactgc cacggcgtgaaaggacaaaagggagaaagaggcctcccggggttacaaggggtcatcggg tttcccggaatgcaaggacccgaggggccgcagggaccaccaggacaaaagggtgacacc ggcgagcccggactgccaggcactaaagggacgagaggacccttgggagtgcctggttac cctggaaacccaggacttcctggtattcctggccaggatggtcctccgggtcccctaggt attccaggatgcaacgggacaaagggtgagagagggcctgtaggacctcccggtttgcct ggattcgccggaaatcccggaccaccaggattaccgggaatgaagggagatccaggtgag attctgggctatataccagggaccctgctggtaggcgaaagaggctttcctggacagccg ggagcacctggttcaccaggtctgccaggactgcaaggccccgtcggccccccgggattc actgggccaccgggtcctccaggcccgcctggccctccaggtgaaaaggggcaaatgggc ttgagctttcaagggccgaaaggtgaaaagggtgatcaaggggtgagcgggcccccagga ttaccaggacaggctcaagtcatcacgaaaggagacacggccatgcggggcgagaagggt caaaaaggtgaacctggatttcaggggatgccaggcattggagagaaaggagaacctgga aaaccagggcctcgcggaaaaccaggaaaagatggtgaaaaaggagaaaaagggagccca gggtttccgggcgattcggggtacccaggacagccaggccgagagggtttgaagggacag aaaggtgaagcaggtcctcccgggctgcctggaactgttatcggcacgggacccttggga gagaaaggagagcccgggtacccagggggtccaggggcgaaaggggagacaggtcccaaa ggtttcccaggaatacccggccagccaggccctccaggcttcccaactccggggctgatc ggtgcccccggcttccccggcgacagaggagagaagggtgaaccgggcttgccgggcgtg tcgctgccgggacccagtggaagggacgggcttcccggcccccccggcccccccgggccc cccgggcagccgggccacacaaatggaatcgtggaatgccagcccggtccgccaggtgac cagggtccccccggaattccagggcagccggggttgacgggcgaagttggagaaaaaggt caaaaaggagacagctgcctcatctgtgacacaacagagcttcgtgggcccccagggcca cagggacctcccggagaaataggtttcccaggacagccaggggccaagggtgacagaggc ttgcccggcagggatggtctggaaggagtgcctggtccgcaaggctcgccggggctcatg ggccagccgggagccaagggggaacccggtgagatctacttcgacatccggctcaagggc gacaaaggagaccccggcttcccaggccagcccggcatgccaggcagagcgggctccccc ggaagagacggccacccgggtctgcccggccccaaaggctccccgggttcagtaggattg aaaggggagcgtggccccccaggaggtgtcggattccccgggagccgtggcgacatcggc cctccggggcctccaggcttcggcccgattggccccattggtgacaaaggacagatgggc ttcccaggaaaccccggggccccaggccagccaggtcccaagggagaggcaggaaaagtc gtgcccctgcccggcccccctggagcagaaggacttcccgggtcccccggcttccagggg ccacaaggtgaccgaggttttcctggaagtcccggaaggccgggcctcccgggagagaag ggcgccatcggccagcctgggattggatttccagggcctcccggccccaaaggcgttgat ggtttacctggagacgctggacctcctgggaatccgggtcgccaaggcttcaacggctta cctggcaaccccggtccacctggccagaagggcgagcctggaatcggtctgccgggactt aaaggcctgcctgggataccgggcatccccggcacccctggggagaagggaaacgtcgga ggaccgggagttcctggagagcacggcgccatcggcccccccggcctccaggggctcaga ggtgacccgggacctcctggattgcaaggccccaaaggagctccgggagtccccggaatc ggcccccctggagcaatgggcccccccggaggacagggacccccagggtcatcaggcccc cccggagtgaaaggagagaaaggcttccccggcttcccaggcctggacatgccgggcccc aaaggagacaaagggtcccaggggctccccggcctgacggggcagtcggggctgcctggc cttcctggacagcagggcacccccggccagcccggctttccaggtcccaagggagagatg ggcgtcatggggaccccggggcagcccggctcgccaggaccagcaggcgtgccaggattg ccgggtgccaaaggggaccacggcttccctggctcttcgggacccaggggagaccctggc ttcaagggtgacaaaggcgacgtggggctccctggcaagccaggctccatggataaggtg gacatgggcagcatgaagggcgagaagggagaccaaggcgagaaaggacaaactggtccg accggtgataaaggatcccggggagacccgggaacgccaggcgtgcctggaaaggatggt caggcaggacaccccgggcagccaggacctaaaggtgatcccggtgtgagcgggatccca ggcgctccgggacttcctggccccaaaggatccactggtggaatgggcctaccaggaatg ccaggaccaaaaggtgtggctggcatccccggcccgcagggcattcctggcttacctgga gacaagggggcaaaaggagagaaagggcaggcgggtctgcctggcattgggattccagga cggcccggagacaagggagaccagggcttatcaggatttccaggaagccctggcgagaag ggagagaaaggaagcactgggatcccaggaatgcccgggtcgccgggccccaaaggctcc ccgggcagtgtcggctatccgggaagccctgggttgcctggagagaaaggtgacaaaggc ctcccaggactggatggcattcctggcatcaaaggagaagcaggtcttcctgggaagcct ggccccacgggcccagccggccagaaaggggagcctggcagcgatggaatcccagggtca gtgggagagaagggcgagccaggtctgcctggaagaggactcccagggtttccagggagc aaaggagagaaaggttcaaagggcgacgtgggcttccccgggttagccgggagcccagga attcctggatccaaaggagaacaaggcttcatgggtcccccgggaccacagggacagccg ggattgccagggaccccaggccacgcggtagaggggcccaaaggagaccgcggcccgcaa ggacaacccggcctgccagggcatccgggacccatggggcctccaggcctccccggactc gatgggctgaaaggtgacaaggggaacccaggctggccgggcactccgggagcgccaggg cccaagggagacccaggattccagggtatgccgggcattggcggctctccaggaatcaca ggagccaagggtgatatgggacttccaggagttccagggtttcaaggtcagaaaggcctc cccggcctgcagggagttaaaggtgaccaaggagaccaaggcttcccgggaactaaaggt cttcccggccccccaggtcccccaggtccattcgacatcatcaagggggaaccagggctc cctgggcctgagggccccgcaggtctgaaagggcttcagggacctccaggcccgaaagga cagcaaggtgtgacggggtccgtgggcttacctgggcccccgggtgagcccggcttcgac ggcgcccccggccagaagggagagaccgggcccttcggccctcctggtccacgaggcttc ccgggtccgcccggccctgacgggctgccgggatccatgggtcccccgggcaccccatcc gtcgatcacggcttcctcgtgacccggcacagtcagacaatagacgacccccagtgtcct cctgggaccaaaatcctctaccacgggtattctctgctctacgtgcaaggcaacgagcgg gcgcacggccaggacctgggcacggcaggcagctgcctgcggaagttcagcaccatgccc ttcctcttctgtaacatcaacaatgtctgcaacttcgcctcccgcaacgactactcgtac tggctgtccaccccggagcccatgcccatgtccatggcgcccatcaccggggacaacatc cggcccttcatcagcaggtgtgctgtgtgtgaggctccggccatggtgatggccgtgcac agccagaccatccagattccgcagtgccccaccggctggtcctcgctctggatcggctac tccttcgtgatgcacaccagcgccggggctgaaggctctggccaggccctcgcctccccc ggctcgtgtctggaggagttcaggagcgcccccttcatcgagtgccacggccgcggaact tgcaattactacgccaacgcttacagcttttggctcgccacgatagagcggagcgagatg ttcaagaagcccacgccgtccacgctgaaggccggggagctgcgcacccacgtcagccgc tgccaagtatgcatgcggaggacatag

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