Cervus canadensis (wapiti): 122450203
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Entry
122450203 CDS
T07554
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04142
Lysosome
ccad04144
Endocytosis
ccad04721
Synaptic vesicle cycle
ccad04961
Endocrine and other factor-regulated calcium reabsorption
ccad05016
Huntington disease
ccad05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122450203 (CLTC)
04142 Lysosome
122450203 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
122450203 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
122450203 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122450203 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
122450203 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122450203 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccad04147
]
122450203 (CLTC)
Membrane trafficking [BR:
ccad04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122450203 (CLTC)
Exosome [BR:
ccad04147
]
Exosomal proteins
Proteins found in most exosomes
122450203 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
122450203
NCBI-ProteinID:
XP_043338362
LinkDB
All DBs
Position
1:complement(49438486..49504969)
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPAYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatcttcagctccagaacctgggtata
aacccagcaaacattggcttcagtaccttgactatggagtcagacaaattcatctgcatt
agagagaaagtaggagagcaggcccaggtggtaattattgatatgaatgacccaagtaat
ccaattcgaagaccaatttcagcagacagcgccatcatgaatccagccagcaaagtaatt
gcactaaaagctgggaaaactctccagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgactgatgatgtcaccttctggaaatggatctctttgaatacggttgcc
cttgtcacggataatgcagtttatcattggagcatggaaggagagtcgcagccggtgaaa
atgtttgatcgccactcgagcctcgcagggtgccagattatcaattatcgaaccgatgca
aagcaaaagtggttacttctgactggcatatctgcacagcaaaatcgtgtggtaggagct
atgcagttatattccgtagataggaaagtgtctcagcccattgaaggacacgcggctagc
ttcgcacagtttaagatggaaggcaatgcagaagagtcaacgttgttttgttttgcagta
cggggtcaagcgggagggaagttacatatcattgaagttggcacaccaccgaccgggaac
cagccgtttccaaagaaggcagtggatgttttctttcctccagaagcacagaatgacttt
ccggttgcgatgcagatcagtgaaaagcatgatgtagtattcttgattacgaagtatggt
tacatccacctctatgaccttgagactggtacctgcatctacatgaacagaatcagtgga
gaaacgatctttgtcaccgcacctcatgaagccacagcgggaataattggagtaaacaga
aagggacaggttctctcagtatgtgtggaagaagaaaacataatcccttatatcaccaat
gtcctacaaaatcctgatttggctctgagaatggctgtacgtaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctctttttgcccaaggaaattactcagaggca
gcaaaggtggctgctaatgcaccaaagggaattcttcgtaccccagacaccatccgtcgg
ttccagagtgttccagctcagccaggtcaaacttcacccctacttcagtactttggaatc
cttttggaccagggtcagctaaataaatatgaatccttagaactgtgtaggcctgtactt
cagcaggggcggaaacagcttttggagaagtggttaaaagaagataagctggaatgttct
gaagaactaggagacctggtgaaatctgtggaccctacattggcacttagtgtgtactta
agggctaacgttccaaataaagtcattcagtgctttgcagaaacaggtcaagtccagaag
attgttttatatgctaaaaaagttggatatactccagactggatctttctgctgagaaat
gttatgcgtatcagtccagatcaggggcagcagtttgctcaaatgttagttcaggatgaa
gaacctcttgctgatatcacccagattgtcgatgtgtttatggaatacaatctaattcag
cagtgtactgcattcttgcttgatgcgctgaagaataatcgcccatctgaaggtccttta
cagacgaggttgcttgagatgaaccttatgcatgcacctcaggttgcagatgctattctg
ggcaatcagatgttcacgcattatgaccgggctcacatcgctcagctgtgtgaaaaggcc
ggcctcctgcagcgcgcgttagaacatttcactgacttgtatgatatcaagcgtgcggtt
gttcacacccatcttcttaaccctgagtggttagtaaattactttgggtccttatcagtg
gaagactccctggaatgtctcagggccatgctgtctgccaatattcgtcagaatctacag
atctgtgtacaagtggcttctaagtatcacgaacaactgtccactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtcttttttattttttgggatccattgttaac
tttagtcaagacccagatgtgcactttaaatatattcaggcagcttgcaagactgggcag
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatcctgagcgagtcaag
aattttctcaaggaagcgaagctaacagatcaattaccacttatcattgtatgcgatcga
tttgactttgtccatgatttggtgctctatttatatagaaataatctccagaagtatata
gagatatatgtacagaaggtgaatccaagtcgacttcctgtggttattgggggattactt
gatgttgattgctctgaagatgtcattaaaaacttgattcttgttgtaagaggtcaattc
tctactgatgagcttgttgctgaggttgaaaaaagaaacagattgaaactgcttctgcct
tggctggaggccagaattcatgagggctgtgaagagcctgctactcacaatgcattagcc
aaaatctacatagacagtaataacaatccagagaggtttcttcgggaaaatccttactat
gacagtcgtgttgttggaaagtattgtgagaagagagatccacatctggcctgtgttgct
tacgagcgtggccagtgtgatctggagcttatcaatgtctgcaatgagaattccctcttc
aaaagtctttctcgctatctggtacggcggaaggacccagaattgtggggtagtgtgctg
ctggaaagcaatccttacaggagacccctcattgatcaggttgtacagacagccttgtct
gaaactcaggaccctgaggaagtgtcagtaactgtcaaggcctttatgacagcagacctt
cctaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagtgaa
cacagaaacctgcaaaacctcctcatcctcactgcaatcaaggctgaccgtacccgtgtt
atggagtacattaaccgcttggataattatgatgccccagatattgccaacatcgccatc
agcaatgagctctttgaagaagcatttgccattttccggaaatttgatgtcaatacctca
gcagtacaggtcttaatcgaacatattggaaacttggatcgggcctatgagtttgctgaa
cgctgcaatgaaccggcagtctggagtcagcttgcaaaagcccagttgcagaaaggaatg
gtgaaagaagccattgattcttatatcaaagcagatgatccttcatcgtacatggaagtt
gttcaggccgccaatactagtggaaactgggaagagctagtgaagtacttgcagatggcc
cgcaagaaggctcgtgagtcctatgtggagacagaattgatctttgcactggctaaaaca
aaccgcctggcagagttggaagagttcatcaatgggccaaataatgctcatatccagcaa
gttggtgaccgttgttacgatgaaaaaatgtatgatgctgctaagttgttgtacaataat
gtttccaattttggacgcttggcatctactctggttcacctgggtgaatatcaggcagct
gttgatggagctaggaaagccaacagtactcgaacatggaaagaggtctgctttgcctgt
gtagatgggaaggagttccgtctcgctcagatgtgtgggcttcacattgtagtacatgca
gacgagttggaggaacttatcaactactatcaggatcgtgggtattttgaagagctgata
accatgttggaagcagcactgggacttgagcgagctcacatggggatgttcaccgaatta
gctattctgtattctaagtttaagccacagaaaatgagggagcacctggagctgttctgg
tccagagtgaatattcctaaggtgctaagagctgcagaacaagcccatctttgggcagaa
ttggtgtttttgtatgacaaatatgaagaatatgataatgccataattaccatgatgaat
catccgactgatgcatggaaagaagggcagttcaaagacatcattaccaaggttgccaat
gtggagctatactacagagcaatacaattctacttagaattcaagccactgttgttaaat
gatttgctgatggtgctgtctccacggttggatcatactcgtgcagtcaattatttcagc
aaggttaaacagctaccactggtgaaaccctatttgcgttcagttcagaaccacaacaac
aaatctgtgaatgaatcactgaacaacctctttattacagaagaagattatcaggctctg
agaacatcgatagatgcttatgacaactttgacaatatctcacttgctcagcgtttggaa
aagcatgaactcattgagttcagaagaattgctgcttacctcttcaaaggcaataatcgc
tggaaacagagtgtagagctgtgcaagaaagatagcctgtacaaggatgcaatgcagtat
gcctctgaatctaaagatactgaattggctgaagagctcctacagtggtttttgcaggaa
gaaaaaagagagtgctttggagcgtgtctctttacttgttatgatcttttaaggccagat
gttgtcctggaaactgcgtggaggcacaatatcatggattttgccatgccctatttcatc
caagtaatgaaggaatatttgacaaaggtggataaattagatgcttcagaatcactgaga
aaagaggaagaacaagctacggagacacaacctattgtttatggccagccccagttgatg
ctgacagcaggacccagcgttgcagtccctccccaggcgccgtttggttatgggtacact
gcaccagcctatgggcagccacagcctggctttgggtacagcatgtga
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integrated database retrieval system
