Cyanistes caeruleus (blue tit): 111933048
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Entry
111933048 CDS
T05602
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111933048 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccae03041
]
111933048 (PRPF38A)
Spliceosome [BR:
ccae03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111933048 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
111933048 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
111933048
NCBI-ProteinID:
XP_023788179
LinkDB
All DBs
Position
8
AA seq
261 aa
AA seq
DB search
MELKYVGGVYGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTG
TAIDCYKYLEPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVL
EEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERIPSPDHRRRGYRDLDKPRRSPVVRY
RRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHR
SHSKSPERSKKSHKKSRRGNE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagtacgtggggggcgtctatggagggaacattaaacccacgcccttcttg
tgcctgacgctaaagatgctgcagatccagcccgagaaggacatcattgtggagttcata
aaaaacgaagacttcaagtatgtccgaatgcttggagcactgtacatgagactgacaggc
actgccatcgactgctacaagtacctggaaccgctgtacaatgactatcggaaaattaaa
agtcagaacagaaatggggaatttgagctgatgcacgtggatgaatttattgatgagcta
ctccacgaagaacgtgtttgtgacatcatcctgcctcgactgcagaaacggtatgttctg
gaagaagctgaacaacttgagcctcgtgttagtgctctggaagaagatatggatgatgta
gaatctagtgaggaggaggaagaagaagatgaaaagctggaacggatcccatctcctgac
caccgcaggaggggctacagggacctggacaagccccgcagatctccagtggtgcggtac
cggcggagccggagcaggtccccgaggaggcgcagccgctctccaaagagaagaagccca
tcaccgcgccgggagcggcatcgcagcaaaagcccgagacggcaccggagcagatcccgg
gagaggcgccacagatcgagatcgaaatctccagggcatcaccgtagtcacagacacaga
agtcattccaaatcacctgaaagatctaagaaaagtcacaaaaaaagtcggcgagggaat
gaataa
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