KEGG   Cyanistes caeruleus (blue tit): 111935793
Entry
111935793         CDS       T05602                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111935793 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccae03021]
    111935793 (AFF4)
Transcription machinery [BR:ccae03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     111935793 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 111935793
NCBI-ProteinID: XP_023792094
LinkDB
Position
13
AA seq 1163 aa
MNREDRNVLRMKERERRNQEIQQGDEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMTDLIGDRPLQKIVAIPKPSVPAAPDDKPTPGFFGEQRHGAGSHQSSKWTPVGPAPSTS
AQSQKRSAGLGGHGQRSGGGAAGAGARHERDSYGGGGRKKGQHGSEHSKGRSGSPGKPPA
VSSLASGHSRAHGGDHHGKDHQRSKSPRDPEPSWDSPSRVPSFASGQHSNQSFPPSLMSK
SSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQTHGGGVNELKPSSKAHLTKLKIPSQPL
DASASGEVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGEQKRY
NPSSKTSNGHQSKSCESNQTDMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSNSEPSQHN
SEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNW
LNKVNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYTDQGGSKDSISSTPGRDSKPTQ
KGSESSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMATNIP
SNRHKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENE
SLPPSSQTPKYSESNRTPVKSSMEEDDSFFRQRMFSPMEEKELLSPLSDPDERYPLIVKI
DLSLLSRIPGKPYKDADAAKAEKKSAPEKHARESQKQPSDKSSTKGKRKHKQNEDENRAS
ESKKTKLEEKAPSGHKNSSSRESSKPSAVKEKDLLPSPAAPALQKDSKQEHGSRKRTVSQ
SSSLKSSSNPGKDSSSGSKSNSSSKQKKTEGKGSSSAKEAKEKVLNNSSSCPPASAQATE
SVKSRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALE
KNAQESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQALLYLRLFKLK
KESALKYSKTLTEHLKNCYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGAANPS
GSGSSVTIPQRIHQMAASYVQVTSNFLYATEIWEQAEQLSREQKEFFAELDKVMGPLVFN
TSIMTELVRYTRQGLHWLRLDAK
NT seq 3492 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgcatgaaagaaagggaaaggcgaaatcaagaa
attcagcagggtgacgaagccttcccacccaactctcctctctttgctgaaccgtacaaa
gtgaccagcaaagaagacaagctgtccagccgcatccagagcatgctggggaactatgat
gagatgacggatctcatcggggaccggccgctgcagaagatcgtcgccattcccaagccc
tcggtccccgccgcgcccgatgacaaacccacgcccggcttcttcggggagcagcggcac
ggcgcgggctctcaccagagcagcaaatggaccccggtggggccggcccccagcacctcg
gcccagtcccagaagcgctcggcggggctggggggacacgggcagcgctccgggggcggc
gcggccggcgccggggcccggcacgagcgcgactcctacggcggcggcggccgcaagaag
ggccagcacggctcggagcactccaagggccgctccggcagccccgggaagcctccggcc
gtgtcctcgctggcctccggccactcgagagcccacggcggcgaccaccacggcaaggac
caccagcgctccaagtcgccccgggaccccgagcccagctgggactctccctcccgcgtg
ccctcgttcgccagcgggcagcactcgaaccagtccttccctccctcgctaatgtccaag
tccagttcaatgttgcagaaacccactgcctacgtcaggccgatggacgggcaggaatcc
atggaaccaaagttatcctcggaacactacagcagccagacccacggcggcggcgtcaac
gagctgaagcccagcagcaaagcgcacctgaccaagctgaaaattccttctcagccgctg
gatgcatcagcctctggtgaggtgagctgcgtggatgaaatcctcaaagagatgacccac
tcctggcctcctccactgactgccatccacaccccctgcaaaactgaaccctccaaattc
ccctttccaacaaaggagtctcagcagtccagttttggcactggagaacagaaacgatac
aatccctcatccaaaacatccaatggtcatcaatccaaatcatgtgaatcgaaccagaca
gatatgttgaaagatgacttaaaacttagcagtagtgaagacagcgatggagagcaggac
tgcgataagacagtgccaaggagcacacctggaagtaattctgagccttcccagcacaac
agtgaaggagcagataactccagggatgactcgagcagccacagcggctccgagagcagc
tctggctccgactcggagagcgagagcagctccagtgacagcgaggccaacgagccatcc
cagagtgcatcccccgagccagagccaccgcccacaaacaagtggcaactggataactgg
ctgaacaaagttaattcccataaagtgtcaccagcttcttccgtggacagcaatatccct
tcttcccaaggctacaagaaagagggacgggatcagggtacagggagtgggtacactgat
caaggtggatccaaggactccatttcttctacaccagggagagattccaaacccacccag
aagggctcggagagcagtcgtgggaggcagaaatcacctgcccagagcgacagctcgact
cagaggaggactgtagggaaaaaacagcccaagaaagcagaaaaaacatctgtggaagag
cccagagggggtcttaaaatagaaagtgaaaccccagtagacatggcaacaaatatccct
tcaaacaggcacaaggcagccaccaaaggctccaggaaacccaatataaagaaggagccc
aagtcttcccctcgacctacaacagagaaaaagaaatacaaggcttcaagcaaatctgcc
cagaaatccagggaattcatcgaaacagatacctcatcctctgattcagatgaaaatgag
agtctgcctccttcctcacaaacacccaaatactctgagagcaataggactcctgttaaa
tcttccatggaggaggatgacagcttttttcggcaacgaatgttctctcctatggaagag
aaagagcttctgtccccactgagtgatcctgatgaaaggtacccactcattgtgaagatt
gacctgagcctcttatccaggataccagggaagccttacaaggacgctgatgctgccaag
gcggagaagaagagcgctccggagaaacacgcccgggagtcccagaaacagccctcggac
aagagctccacaaaaggcaaaaggaaacacaaacagaacgaggatgaaaacagagccagt
gaaagcaagaaaacgaaactggaagaaaaagctccctcaggacacaagaattccagcagt
agggagtcttcaaagccaagtgctgtaaaagagaaggatttgctgccctcccctgctgcc
ccagccctgcagaaggattccaagcaggaacatggctccaggaagagaacagtcagtcag
tcctcatccctaaaatccagcagcaacccaggcaaggacagcagcagtggcagcaagagc
aattcctcttccaagcagaagaagacagaggggaaggggtccagcagtgccaaggaagcc
aaggagaaggtcctgaacaattcctccagctgccctcctgcctctgctcaggccacagaa
agtgtgaagtcgaggagagcaaagcttgtttttgatgataggacttactcagctgatcac
tatttgcaggaagcaaagaagctgaaacataacgcagatgctttgtcggacaggttcgag
aaggccgtgtactacctggatgctgtcgtgtccttcattgagtgtgggaatgcattggag
aaaaatgctcaggaatccaagtccccgttccctatgtattcagaaactgtggaattaatc
aaatacactatgaaactgaagaattatttggccccggatgcgacggctgcggacaaaagg
ctggcagtgctttgccttcgatgccaagctcttctgtacctgaggcttttcaaactgaaa
aaggaaagtgcattgaaatactcgaaaactctgactgaacatctgaagaattgctacaat
aattctcaagcaccgtcacctggtatgggaagcaaacctgtcgggatgccatctccagtc
tctccaaagctgtctccagggaattcaggaaattactcttccggggcagccaacccttca
gggagcgggtcctcggtgacgatcccgcagcgcatccatcagatggctgccagctacgtc
caggtcacctccaacttcctctatgccactgaaatctgggaacaagcagaacagctctcg
agagaacagaaagagttctttgctgaactggacaaggtgatggggccgctggtgtttaac
acgagcatcatgacggagctggtgcgttacacccggcagggcctgcactggctgcgcctc
gacgccaagtga

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