Cyanistes caeruleus (blue tit): 111937689 Help Entry 111937689         CDS       T05602                                  Symbol CUX1 Name (RefSeq) protein CASP isoform X1   KO K09313   homeobox protein cut-like Organism ccae  Cyanistes caeruleus (blue tit) Brite KEGG Orthology (KO) [BR:ccae00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ccae03000]     111937689 (CUX1) Transcription factors [BR:ccae03000]  Eukaryotic type   Helix-turn-helix    Homeo domain CUT     111937689 (CUX1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CUT Homeodomain Homeobox_KN Motif Other DBs NCBI-GeneID:  111937689 NCBI-ProteinID:  XP_023794900 LinkDB All DBs Position 19 AA seq 1544 aa AA seqDB search MLGRAAFPLERELDTTATILANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSF QGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRE TLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERKLQ ETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERAN QRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKEREIA QLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQADYEEVKKELNI LKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGSARRKGKDQPES QRPATLPASPPSQLLRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASPSLPLASTGKFAL NSLLQRQLMQSFYSKAMQEAGSTSMIFPTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSE SAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLT VRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRRNGSEGNITTRI RTTESGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSILQQARREMEAQ QAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSSVTDSSISALQN LSGLKKEPQEAPVLELHGISDSAQGMLRHVKNELGRGGVWKDHWWNTVQHERRNAALPED IKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSELSMTGASRSETP QNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIF GEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVLPAQGQQQGQVL HSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPPIETSKD GKSQESSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLVW LTSLKSSRRARKGAPNSALGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRM QLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLK KPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFI EEIQAGSQSQAGSSDSPSARSSRAAHSSEGDSCDGVDAEGPPDGKPSGPEADEFSNAAAK SQGGPAEPAFEAGEEALRGARPSERAEPESLEDTDDEGRLRAPRQSSPPAPQRPGDALET LPNSATEGDASTSAASTSVLTGESSYKSKESSEKISSVPSTSSTPASGSQKANSLQSLFG FSEAASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF NT seq 4635 nt NT seq  +upstreamnt  +downstreamnt atgctgggcagagccgcattcccgctggagagagagctcgataccacagcaacaatattg gcgaaccggcaagatgaaagtgagcagtccaggaaaaaacttattgagcaaagtcgtgag ttcaagaaaaacactccagaggacctgcgcaaacaggtagctccattactgaagagtttc cagggagagattgatgcattgggtaaacgaagcaaagaagcagaggcagccttcttgaat gtttataagagattaattgatgttccagatccggttccagccttggatttaggacagcag cttcagctgaaggttcaacgcatgcacgatattgaaacagaaaaccagaaacttagggaa actctggaggaatacaataaagaattcgccgaggtgaaaaatcaggaggttacaataaaa gcacttaaggagaaaatccgagaatatgaacagaccctgaagaaccaagcggagaacata gcccttgaaaaggaacaaaagttacaaaatgattttgcggagaaggagagaaaattgcag gagacccagatgtcaacagcctcgaagctggaggaagccgagcacaaagttcaagctttg caaacagccttggaaaaaaccaggacagaactatttgatctgaaaacaaaatacgatgaa gaaactactgcaaaggctgatgaaatcgagatgatcatgacagaccttgaaagagcgaat cagagggcagaggtggctcagagagaggcagagaccttaagggagcagctctcatcagct aacaaatctctccaacttgctacgcagatccagaaggcacctgatgtggagcaggccatc gaggtgctgacacgctccagcctggaagtggagctggctgcgaaggagcgcgagatcgcc cagctggttgaagatgtccagagactccagggcagcctcaccaagctgagggagaactcc agcagccaaatctcccagctggagcagcagctgacagccaagaacagcacactcaaacaa ctggaagaaaaactgaaaggacaggctgattatgaagaggttaagaaagaattaaatata ttgaaatccatggagtttgcaccatctgaaagctctggtgcgcaggatgcatccaagccg ctggaggtgctgctgctggagaagaaccgctcgctgcagtcagagaacgccacgctgcgc atcaccaacagcgacctgagcgggtcagccaggagaaaagggaaagaccagcctgagagt cagcgtcctgcaaccttgccggcctcccctccttcccagttgctccgcaacgcgggggag caggcttccaatactaatggtacacaccagttctcaccaacgggtttaagtcaagacttt ttcagctcatccctggcgagccccagcttacccctggcctccacaggaaaatttgcacta aactctctcctccagcgacagctaatgcagtccttctactccaaggcaatgcaggaagca ggaagcacaagcatgatttttccaacaggtccatacagcacaaactccatatcttcccaa agtccattacaacaaagcccggatgtaaatggcatggccccatctcccagccagtcagaa agtgctgggagcatctctgaaggagaggagatagacacggccgaaattgcacgtcaggtg aaagagcagttgatcaagcacaatattggacagcggatatttggacattatgtgttggga ctgtcacaagggtctgtgagtgagatcctggcccggccaaagccatggaataaactgact gtgagaggcaaggagccatttcataagatgaagcagttcctgtcggacgagcagaacatc ctggctcttcgcagcatccagggcagacaaagagagaatccaggccagaacctgaacaga ctatttcaggaagtaccgaaacgaagaaatgggtctgaaggtaacataaccacacgaatc cgaaccacagagtctggctctgatgaagccatcaaatccattctcgaacaagccaaaagg gagctgcaagtacagaaaacagctgagccggctcagccgccttctgcctctagcagtggc aattctgatgatgcaattcgatccattctgcaacaagcccgacgggaaatggaggcacag caggctgcccttgaacctgccttaaaaacaccacctctatctcaagctgacatttctatc ctgtcccccaaactagtgtctacacctgcaatgtcttcggtttccagctattctcctttg gccatatccctgaagaaacactcatctgtcactgattccagtatctctgcattgcagaac ctctctgggctcaaaaaggagcctcaggaggcacctgttttagagcttcatggaataagt gattctgcccagggtatgttgaggcatgttaaaaatgagttgggacgtggtggtgtttgg aaggaccattggtggaatactgtgcagcatgagagaagaaatgcagctcttcccgaagat ataaaagttgaggaagccagtggtggaaaagaaaaggtcagcaatcagactaggccagat cgtagccagctccaaggaccgtcttcttccgagtattggaaagagtggccaaacgcggaa tctccgtactcgcagagttctgaattgagcatgactggggcgagtcgcagtgagacacca caaaatagccccctcccttcatcccctatcgtgtccttgtccaagccatccaaaccttcg gttcctccactgacacccgagcagtatgagatttatatgtaccaggaggtggatacgata gagctaacgcggcaggtcaaggaaaagctagcaaagaatggcatctgccaaaggatcttt ggggaaaaggtattggggctgtcccaaggaagtgtcagtgacatgctctccaggccaaag ccatggagcaaattgacccaaaaaggccgagaaccatttattcgtatgcagctctggttg aatggtgagctgggacagtgtgtcctgcccgcacaagggcagcaacaaggacaagtcctt cactctgtgacatcattacaggattccctacagcagggatgtgcaagctcagaaagtact ccaaagacttctgccagttgcagtcctgctcctgaatctcccatgagttccagtgaatca gtgaaaagcctgactgagttggtacagcagccctgtccccccatcgagacgagtaaggat ggcaaatcccaggaatccagtgagccacctgcatctgaatcccaatccacgacccctctg ccactctctggccactcagcactcagcatccaagaactggtggccatgtcccctgagctg gacacctatggcatcaccaagagggtcaaggaagtgctcacggacaacaatcttgtgtgg ctgacaagcctaaaaagcagcagaagagccaggaaaggtgccccaaactctgcattaggt cagcgtttgttcggggagacaatcctagggctgacacaaggctctgtctctgacctgctg gctcgccccaagccctggcacaagctgagtctgaagggaagggaaccctttgtccgcatg cagctgtggctcaacgatcccaacaacgtggagaagctgatggatatgaagcgcatggag aaaaaagcctacatgaaacggcggcacagctccgtcagcgacagccagtcctgtgagtcc tcgtccgctggcatcgactacagccagggtgccagcccccagccccagcaccagctcaag aagccccgggtggtgctggcaccagaggagaaagaagctctcaaacgagcctaccagcaa aagccatacccatcaccaaaaaccattgaggaactcgccacgcagctcaacttgaaaacc agcaccgtgatcaactggttccacaattacaggtcccgcatccgccgggagctgttcatc gaggagatccaagccgggagccagagccaggccgggtcgagtgactccccttcagccaga agcagcagggcggcccacagctccgagggggacagctgcgacggcgtggacgcggagggc cctcccgacggcaagcccagcggcccggaggcggacgagttcagcaatgcggccgccaag tctcagggagggcccgccgagccggctttcgaggcgggggaagaggcactgcgaggcgcc aggccttcggagagagcggagcccgagagcctggaggacaccgacgacgagggccggctc agagcgccgcgccagagctccccgccggcaccgcagcgcccgggagacgctctggagaca ctgccaaactctgccacggaaggggatgcctctacctcagctgcctccacctcagtcctt acgggggagagctcctacaagtcaaaagaaagttcagagaaaatctccagtgtgccaagt acgagctcgacgccggcctcaggctcgcagaaagccaactctctgcagagcttgttcggc ttctcggaggcggcgagctccaggaacacgcgagacagctccctgaggaaaaagaaagcg gccaacttgaacaacatcatccaccgcttggagaaggccgcgagtcgggaagaggccgtc gagtgggagttttga

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