Cajanus cajan (pigeon pea): 109789791
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Entry
109789791 CDS
T04868
Name
(RefSeq) flowering time control protein FY
KO
K15542
polyadenylation factor subunit 2
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109789791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109789791
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109789791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
109789791
NCBI-ProteinID:
XP_020204413
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MMYNDPQHQHQHQHQQHQHQHQQHQYQQQQQQQQQHFHHQPPGPEFHRGPPPPSQPPPVM
RQGSASSTNVAPEFHHPGPGGPPPPHYDVHGDSHGAKRMRKLTQRKAVDYTSTVVRYMQI
RMWQRDSRDRTVLQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTP
TGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQ
NNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVK
SVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQ
IIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEIS
NAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTARDRFNTGMQGYPDQNPVAGR
MGGNFPIAEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAP
PLPPGPHPSLLTANQQQPYQQNPQQIPQHQHQALPPQMGPLPIPPNMPQLQHPSHSPMVP
HQHLPRPPPQMPIGMPGSLPGISSVPTSHAMPMPGPMGMQGAMNQMGTPMPQGPYVGMNQ
MHSGSLPTSGGPPLGGFPSNLPNMQGPSNASYPQGASFNRPQGGQMPMMQGYNPYQSGNQ
SGMPPNAQPGASHSQMPP
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacaatgatcctcagcaccagcaccagcaccagcaccaacagcaccagcaccag
caccagcagcaccagtaccagcaacaacagcagcagcaacaacagcatttccaccaccag
ccgccgggtccggagttccaccgcggtcctccgccaccgtcgcaaccgccgccggtgatg
cgccaaggctccgcctcctccacgaatgttgcccccgagtttcaccaccccggccccgga
ggaccacctcctcctcattacgatgttcacggtgatagccatggtgcaaaaagaatgcga
aagcttactcaaaggaaagcagttgattatacaagcacagttgtgcgttatatgcagatt
cgtatgtggcagcgggattcaagggataggacagtactgcaacccaccccggcagcagca
attgatatgttgccagcagttggctatccagacaatccatctacaagctttgctgcaaaa
tttgttcatacatccctaaataaaaatcgttgccccattaatcgcgttctttggactcca
acaggccgacgacttattactggctcacagactggggaattcactctttggaatggacaa
tcttttaattttgaaatgattcttcaggctcatgatcaagcaatcagatccatggtctgg
agtcacaacgacaactggatggtctctggtgatgatggaggggcaataaagtattggcag
aacaacatgaacaatgttaaagccaacaaatctgctcataaagaatcagtccgtgacttg
agtttctgtaggacagatttgaagttttgttcgtgctctgatgataccacagttaaagtt
tgggactttgcacgttgtcaagaagagtgttcattaactggccatggttgggatgtgaag
agtgtggactggcatcctacaaaatccctattagtatcaggtgggaaagacaatcttgtg
aaactttgggatgctaaaacagggagagagctttgctcatttcatggccacaaaaatact
gtgctgtgtgtcaaatggaatcaaaatggtaattgggtgttaacagcttcaaaggatcaa
ataataaagctttatgacataagagcaatgaaggagcttgaatcattccgtggacatcgc
aaggatgttactgctttggcatggcatccattccatgaagaatactttgtcagtgggagt
tatgatggttccatcttccattggcttgtcggacatgaaactccacaaattgaaatttcc
aatgctcatgataataatgtttgggaccttgcatggcatcctattggataccttctgtgc
agtggcagcagtgatcatacaaccaaattttggtgcagaaataggccaggagacactgca
cgtgatagatttaacactggcatgcaaggatatcctgaccaaaatcctgttgctggtcgt
atgggtggtaattttcctatagctgaaggcccaacaactccaggaccatttgcccctggg
ttgactcgaaatgagggtaccattccaggtgttggagttgcaatgcccttatctattcct
tctcttgacatgcctcaaggggagcagaagcagccacatcctgtttcaatgggtgctcct
cctcttcccccaggtccacatccctctcttcttactgccaaccaacaacaaccataccaa
caaaatcctcagcagatccctcaacatcaacaccaggctctacctccgcagatgggtcct
ttgcctatacctccaaatatgccacaactacagcacccttcccattcgcccatggtccct
caccaacatttgcctcgccctccgccccaaatgcctattggcatgccaggatctctacca
gggatttcatcagtgccgacgtcacatgcaatgccaatgccaggtccaatggggatgcaa
ggagcgatgaatcagatgggtactccaatgccacaaggtccttatgtgggcatgaatcag
atgcattcaggatccttgcctacaagtggagggccacctcttggtggttttccaagcaac
ttacctaatatgcaagggccatcaaatgccagttatcctcaaggtgcttcatttaacaga
cctcaaggtgggcaaatgcctatgatgcaggggtataatccttaccagtctggtaatcaa
tctgggatgcctccaaacgcacaaccaggggcatcacactctcaaatgccaccatag
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integrated database retrieval system
