Cajanus cajan (pigeon pea): 109793561
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Entry
109793561 CDS
T04868
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109793561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109793561
Spliceosome [BR:
ccaj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109793561
Complex C
U4/U6.U5 tri-SnRNP related factors
109793561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
109793561
NCBI-ProteinID:
XP_020208620
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All DBs
Position
2:complement(25407887..25411623)
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AA seq
390 aa
AA seq
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MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRLTGSDIDVYRYL
EPLYNDYRKLRRKLPDGQFALTHVDEVIDELLTKDYSCDIALPRVKRRWTLESLGSLEPR
RSALEEDFEEEEEKEDNDQPADEIEDRAYEKDYYRGRSPTRERDRDRRRDSHRYRDRDYD
RDYDRDYDRERGRGRDRDRDRDRDRDRERDRDRDRYRLREEKDYGREREGRERERRDRDR
DRGRRRSHSRSRSRSRDRKEHDGGDYRKRHSRSSVSPRRHGDGLEDGEPKKKKEKKEKKE
KKDDGTDHPDPEIAEANKLRAALGLKPLRV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgcacggatccagcagcaaagagcatcagagggacgaaccctcagaacctg
gtggagaagattctccgatcgaagatctatcaaaacacatactggaaggagcaatgcttc
ggcttaacggcggagacgttggtggacaaggccatggagctggaccacctcggcggaacc
tacggcggcaaccgcaaacccactcccttcatgtgcctcgtcatgaagatgctccagatt
cagcccgagaaagaaatcgtcatcgagttcatcaagaacgaggattacaaatacgttagg
attctcggcgctttctacttgcgtctcactggatctgacattgacgtctaccgctacctc
gagcccttatacaatgactatcgcaaactcaggcgaaagctacctgatggacagtttgca
ttgacgcacgtggacgaggtcatcgatgaacttctcacaaaggattactcctgtgatatt
gctttgccacgcgtcaagaggaggtggactcttgaatctctgggttcattagaacctaga
cgaagtgcacttgaagaagattttgaggaggaagaagagaaagaggataatgaccagcct
gctgatgagattgaagatagggcttatgagaaggattattatcgtgggcgaagccctaca
agggaaagagatagggacaggagacgtgatagtcatagatacagggatcgtgactatgac
agagactatgatagagattacgatcgagagcgcggacgtggccgagatagagacagagat
agagacagggacagagatagggagagggacagagacagggaccgatatcgacttagggaa
gaaaaagattatggacgtgagagagagggtagggagcgggagaggagagatagggatcgt
gatcgtggaagacgaaggagtcactcaaggagtcgaagtaggagtagggatcgcaaagaa
catgatggtggggactaccgaaaaagacattctcggagtagtgtaagtcctagaagacac
ggagatggacttgaggatggtgagccaaagaagaagaaggagaagaaagaaaagaaagaa
aagaaggatgatggaactgaccacccagatccagagattgcagaagcaaacaagctacga
gcagctctaggtttgaaaccattgagggtctga
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