KEGG   Cajanus cajan (pigeon pea): 109797458
Entry
109797458         CDS       T04868                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109797458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109797458
   03041 Spliceosome [BR:ccaj03041]
    109797458
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109797458
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109797458
Spliceosome [BR:ccaj03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109797458
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM RRM_3
Other DBs
NCBI-GeneID: 109797458
NCBI-ProteinID: XP_020213092
LinkDB
Position
3:complement(15560405..15564881)
AA seq 336 aa
MDDLKKRKLDEAGNGEFASKEELRFLIEPLAKPQLVDLLAKLGSQYPSIAEEIKSIASAD
PAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIYDKATGKSRGYGFITFKNMESTQQ
ALRAPSKLIDGRLAVCNLACEGLSGTSSAPDLSLRKLYIGSLSPEVTSEMLLNYFLRHGE
IEEGSVAYDKDTNESRGFGFVTYKTAESAKKAIDDLEKTLGGRNIIVKYADFNKGKTGQA
PFPAGVVPMAALPMTPGYMQPGKAHVSSGPPINYSYPQTVAPYSAPPYPNHLPAPSPYST
QGQIPYPPVSAKKDQHGFPPTQPVGMNNYPYYYPKQ
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggatgatttgaagaagagaaagctagacgaagcagggaatggtgaatttgcttccaag
gaagagcttcgcttcctcattgaacctcttgctaaaccacagctcgtcgatcttctagct
aaactagggtcccaatatccttccattgcagaagaaataaaaagtattgcaagtgcagat
cctgcccatcgaaagctttttgttcgtggcttggcatggaataccacttcagaaactttg
cgtgctgcatttcaagagcacggagaaattgaggaaggagctgtgatctatgataaagca
acaggaaaatctcgtggctatggatttatcactttcaaaaatatggaatcaactcagcag
gcattgagagcccctagcaagttaatcgatggaagattggctgtctgtaatttagcttgt
gagggtctaagcggaacaagtagtgctcctgatctctccctgaggaagctttatattgga
agcttatccccagaagtcactagtgaaatgctgcttaactattttttgaggcatggtgaa
atagaggaaggttcggttgcatatgacaaggatacaaatgaatcacgtggctttggcttt
gtaacatacaagacggcagagtctgcaaagaaggccatagatgacttagaaaagactctt
gggggaaggaatataattgtaaaatatgccgatttcaacaaaggtaaaactggccaggcg
ccatttcctgctggagtggttccaatggcagccttacctatgaccccgggatatatgcag
cctggaaaagctcacgtgagctccggccccccaatcaattacagttacccccaaactgta
gcaccatattctgcacctccttatccaaaccatctccctgcaccctctccttattcaaca
caagggcagattccttatcctccagtttctgcaaagaaagaccaacatgggtttccgcca
actcaacctgtaggaatgaacaactacccttattactatcccaagcaatga

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