Cajanus cajan (pigeon pea): 109801005
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Entry
109801005 CDS
T04868
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109801005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109801005
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109801005
mRNA degradation factors
5'-3' decay
Decapping complex
109801005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Motif
Other DBs
NCBI-GeneID:
109801005
NCBI-ProteinID:
XP_020217594
LinkDB
All DBs
Position
1:complement(7443200..7453274)
Genome browser
AA seq
1338 aa
AA seq
DB search
MMASPNPNPNHNHPPPPFDMHSFFNPNPNPNPNTAHSPSSSSSSYPPPFSAAPFHFPAFD
HRSLSFPTPPLQPPPPSNPNAGARLMALLTNPSPQPPPSSSSSSPSSAVLAAATAAAAAL
TRLPSTKVPTGRHLAGERVAYDVDVRLPGELQPQLEVAPITKYGSDPNPVLGRQIAVNKS
YICYGLKQGNIRVLNIHTAVRSLLRGHAQRVTDLAFFAEDVHLLASVGTDGRVYVWKISE
GPDDEDKPQITANIVIALQIVGEEKVEHPQICWHCHKQEILIVGMGKYVLRIDTTKVGNG
EAFVAEVPLRCPVDKLIDGVQLVGTHDAEVTDLSMCQWMTNRLVSSSQDGTIKIWEDRKT
QPLAILRPHDGHPVFSATFFTAPHQPYHIVLITAGPQNREVKLWVSASEEGWLLPSDTES
WKCTQTLELKSSAQPSKDAFFNQVAALPHAGLLLLANAQRNAIYAVHLEYGSNPESTRMD
YIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLSQCLPPPMENLGLEK
SDSSVSRDAVNVEGFHSLDSSVGRTSEMSLTSSAPKTMLPAGSTESGFMARYPLSTGHAE
APISKEISSSNTEPKSVTLVPSSSDPDIVCIPSPPLPLSPRLSRKLSDIRSPQSNLNDQV
GDHPVNDYSIDRQLDPIHRNMSDPLNNDPKNDDKKVKQDDISSVLNPSVMFMQPTHLVTP
SEITKSGSTSETNIIDRKTEGEAKIQDVVDVGNAEVEVKVVGETRSNPNDEFGRQGSQQT
PVSDKEKLFCSQASDLGIEMARECCAISGDTYLAEESGQLDSLGGDSLAQPSDAGEDGLQ
DLAKDAHEKVSGSSTSVAVPPSHVPNAKGKRQKGKNSQASGPSPSSQSVCNSTDSFNETN
GNPSFPSAENAFPQILAMQESINQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRNME
KAVKANSDALWARIQEENAKSEKLLRDRLQQVTGLISNFMNKDLTVILEKTVKKEMASVG
QAVVRAMSPAVEKIISSAIVESFQRGVGDKAVNQLDKSVNSKLEATVARQIQAQFQTTGK
QVLQDALKSSFETSVVPAFEMSCKAMFEQVDATFQKGMVEHSTAVQQRLESAPTSLAMTL
RDSINSASSITQTLSREVLEGQRKLVAFASTRTNSGSLNPLPVQLNNGPLLHEKVEVPLD
PTQELTRLISERKYEEAFIGALHRSDVSIVSWLCSQVDLRGLLTMVPLPLSQGVLLSLLQ
QLACDINNDTARKIAWLTDVAAAINPSDPVIISHTRPIFEQVYQILNHQRSLPTMTGSDL
SSIRLLLHVVNSMLMTCK
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcccccaatcccaatcccaaccacaaccaccctcctcctcccttcgacatg
cactccttcttcaaccctaaccctaaccctaaccctaacaccgcccactcaccctcctcc
tcctcctcctcctaccctccgcccttctccgccgcgcccttccacttccccgccttcgac
caccgctccctctccttccccaccccgcctctccagcctcctccgccctccaaccccaac
gccggcgcccgcctcatggccctcctcaccaacccctccccccagccccctccctcctcc
tcctcctcctcgccctcctccgccgtcctcgccgctgccaccgccgccgccgccgccctc
acgcgcctccccagcaccaaggtccccactggccgccacctcgccggggagcgcgtcgcc
tatgacgtcgacgtcaggctgcccggggagctccagccgcagcttgaggtcgctccgatt
accaaatacgggtcggatccgaacccggttttggggaggcagattgcggtgaataagtcg
tatatatgctatggactcaaacaggggaacattagggtgcttaatattcacactgctgtt
aggtctttgctcagaggccacgctcagagggtcacagacttggcgttctttgctgaagat
gttcatctcttggctagtgttggcacagatggccgtgtctatgtgtggaagatctctgaa
ggtccagacgatgaagataagcctcaaattactgccaatatagttattgctcttcaaata
gtgggggaggagaaagttgaacatcctcaaatttgctggcactgccacaaacaagagatt
ttgatagttggtatgggaaaatatgttttgagaattgacaccacaaaagttggaaatggt
gaagcctttgtggcagaggttcctctgagatgtcctgttgacaagctcattgatggggtt
cagctggttggcacacatgatgcggaggtgactgatttgtcaatgtgccaatggatgacc
aatcgattggtatcttcgtcacaggatggcacaataaagatctgggaagatcgcaagaca
caaccacttgcaattttgagaccccatgacggacatccagttttttctgctacatttttt
actgctccacaccagccctatcatattgttcttataacagcaggaccacaaaatcgggag
gtgaagctttgggtctcagcaagtgaagaaggttggcttctcccaagtgacactgaatca
tggaaatgcactcagacgttggagttgaagagttcagctcaaccatctaaggatgcattc
tttaatcaagttgcagcattgcctcatgcaggtctgcttttacttgcaaatgcccagagg
aatgctatatatgctgtgcatttagaatatggttctaatccagagtcaacacgcatggat
tatatagctgagtttactgtgaccatgcccattctgagttttactggtacaagtgatatt
ctacctcatggtgaacatattgttcaggtttattgtgttcagacacaggctattcagcag
tatgctttggatttatcccagtgcttgcctccaccaatggaaaatttgggactagagaag
tcagattccagtgtttcccgcgatgcagttaatgttgaaggattccactctttagactct
tctgtaggtagaacatctgaaatgtctttaaccagttctgctcccaaaacaatgttacca
gcaggtagtacggagagtggatttatggcaaggtaccctttaagcactggtcatgctgag
gcacctatttctaaagaaatcagcagttcaaatactgaacctaaatctgttacattagtt
ccatctagtagtgatcctgatattgtttgtattccatctccacctcttcctttgagccca
aggttatctaggaaactctctgatatcaggagtccacaatctaacttgaatgatcaagtt
ggggaccatcctgttaatgattattcaatagacagacaattggatcccattcacaggaac
atgtctgacccattgaataatgatccaaagaatgacgacaagaaagtgaagcaggatgac
atttctagtgtacttaacccttctgttatgtttatgcaaccaactcatctagttacacca
tctgagatcacaaaatctggttccacctctgagactaacataattgataggaagactgag
ggggaagcaaagatccaggatgtggttgatgtcggtaatgccgaagtggaagtgaaagtg
gtgggtgagacaagatctaatccaaatgatgaatttggtaggcaggggtcacagcaaact
ccagtttctgataaggaaaaattattttgctctcaggcttcagatcttggtattgagatg
gcccgagaatgctgtgcaatatctggggacacatatcttgcagaggaatctggacaactt
gattctctgggaggagactcgctggctcaaccttctgatgccggtgaggatggactccaa
gacttggcgaaagatgcccatgaaaaggtttctggctcatctacatctgtggcagtacca
ccatctcatgtgcctaatgcaaaagggaaaagacagaagggtaaaaattctcaagcatca
ggcccttccccatcttctcaaagtgtgtgcaattcaactgattcattcaatgaaacaaat
ggaaatccaagcttcccatctgctgaaaatgctttccctcaaattctggcaatgcaagaa
tcaatcaatcagttgttgactatgcaaaaagagatgcagaagcaaatgacaatgatggtt
gctgttccagtgacaaaagaaggtagaaggcttgaggctgccctaggcagaaacatggaa
aaagctgtcaaggccaacagtgatgctttgtgggctcgaattcaggaggagaatgcaaaa
agtgaaaagttgttacgagatcgacttcaacaagttaccggtttgattagtaactttatg
aataaggatctaacagtaatactggagaaaacagtaaagaaggaaatggcttcagttggg
caagcagtagtacgtgcaatgtctcctgctgtggagaaaataatatcttctgctatagtg
gagtccttccagagaggagtgggtgataaggcagtgaaccaacttgataaatcagttaat
tcaaaacttgaagctactgtagctaggcaaatccaagcacaatttcagacaactggcaaa
caggtgcttcaggatgcactcaaatccagttttgaaacatcagtggttcctgcatttgag
atgtcatgtaaagccatgtttgagcaagtggatgctacatttcagaaaggcatggttgaa
cattcaactgctgtgcagcaacgccttgaatctgcacccacttcgttggcaatgacacta
agggattccattaattcggcatcatcaattactcaaaccttgagtagagaggtgcttgag
ggccagagaaagctagtggcattcgcttctacaagaacaaactcaggctcattaaatcct
ttgcccgtccagctgaacaatggtcctttacttcatgaaaaggttgaggtgcccctagat
cccacacaggagctaacaaggttgatttctgaacggaaatacgaggaggctttcattgga
gctctacatagaagtgatgtatccattgtatcttggttatgttctcaggttgatttacgt
ggacttttgacaatggttcctcttcctttaagccaaggtgtattgctttcacttctgcag
cagttggcttgtgatataaacaacgatacagcgcgaaagattgcgtggttgacagatgtg
gctgctgccataaacccgtcagatcctgtgattatatcgcacacacgacccatatttgag
caagtctatcagattctcaatcatcaacgtagcttgcctacaatgactggatctgatctg
tcaagtatccgtcttttattgcatgtcgtcaactccatgcttatgacatgtaaatga
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