Cajanus cajan (pigeon pea): 109801568
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Entry
109801568 CDS
T04868
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109801568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109801568
Spliceosome [BR:
ccaj03041
]
Complex A
U1 snRNP components
U1 related factors
109801568
Complex B
109801568
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
109801568
NCBI-ProteinID:
XP_020218265
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All DBs
Position
6:10935593..10941757
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AA seq
924 aa
AA seq
DB search
MADSASSPATQPPSESAPPNQPDPLPQSTPPPSAANPNSNPTLLPPPPTLLFPAGTPPQL
PGVLPPSFRPLAPQFSPVAAPNPPYQNPAVPPPGVAGAAAPVPQMQPMMPYQVQPGNLRP
FAPIPNGYAAAPQGTVLPAGIPRYPPPYGTMVRPVFPPRPPGVVNIPPVSRPPVAGIPAV
RPIIPPVVRPMVTPSVTQAEKSQNTVYIGKIAPTVENEFMLSLLQLCGTIKTWKRPQDLS
TGTPTSFGFYEFESAEAVLRALRLLNKLNIDGQELKVNVNQALKEHLERYVVQKKTENLK
NKETQAEVVGKDDEGAQPSNANEDAKADTEPSNKADESTNKESRDVANFGIVTDEDREAD
REALEKITKMIEERVKTRPLPPPPPAQPTGDGSVNLTSEQPVKTRDGDSVMDTEKNESAE
NKNDKETNNDNKPTSEHNRPESPDRRHDRKSRERDRDREHKREKERELERYEREAERERI
RKEREQRRRIEEAERQYEAYLKDWEYREREKEKERLYEKEKEKERERKRRKEILYDEEDE
DEDSRKRWRRSVLEDKRKKRLREKEDDLADRQKEEEEIAEAKKKAEEEQKQQRDALKLLA
EHVVNGVNENMATEKITDEVRSIVAEQDTMADYNSREDHIGDGHSLNVINDDSTIASVAP
TDTQSIGNAPTKKLGFGLVGSGKRTTVPSVFHEEEDDEAHKDKKMRPLVPIDYSTEELQA
VQPTVSGPTPPNLVAAAEFAKRISSTNFKEEKVDGERDRSRRSNEKSNHRDRDRSDEDST
HNRDENKERIPDRDRDRDHGSEKLKTSDNKRLLDAKQLIDMIPKTKEELFSYEIDWAVYD
KHQLHERMRPWISKKIKEFLGEEESTLIDYIVSSTQEHVKASQMLERLQIILDEEAEMFV
LKMWRMLIFEIKKVETGLALRSKS
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccgcctcttctcccgcaacccaaccaccctccgaatccgcacctcccaac
caacccgatccacttccccaatccacaccgccaccatccgccgcaaaccctaattccaac
cctaccttgctccctccgccgcccacgcttctcttcccggcgggaaccccgccgcagctc
cccggcgtcctccctccctcattccgccccctcgctccgcaattctcccccgtcgccgcg
cccaacccgccctaccaaaaccccgccgttccaccgcccggcgtggccggcgccgccgcg
ccggtgccgcagatgcagccgatgatgccgtaccaggtccagcctggaaacctgcggccc
ttcgctccgatcccgaacggttacgccgcagctccgcaagggaccgtgcttcccgcggga
attccccgttatccccctccttatggaactatggttcgtcctgtatttcctccacgtcct
cctggagtagttaacatacctccagtatcacgcccacctgttgcagggatccctgcagtt
cgcccgattattcctcctgttgtcagacctatggtaacccctagtgttactcaagccgag
aagtctcagaacacagtttacattggcaagattgcaccaactgtggaaaatgagttcatg
ctgtctctccttcaattatgtggaactatcaagacctggaaacgtcctcaggatttatca
actgggactcctacaagttttgggttttatgaatttgagtctgctgaagcggttctccgt
gccttgcgtcttcttaataaattgaatatcgatgggcaagaactaaaggtcaatgtcaat
caagctttgaaagaacatctggagcggtatgttgttcagaagaaaactgagaacttgaag
aacaaagaaactcaggcagaagtagttggaaaagatgatgaaggtgcacaaccttctaat
gcgaatgaggatgcaaaggctgacacagaaccctcaaataaagctgatgaatcaacaaac
aaggaatcccgtgatgtggcaaactttgggattgtcactgatgaagatagagaagctgat
cgtgaggctttagaaaagatcacaaagatgatagaggaaagggtgaagacaagacctttg
ccaccaccaccacctgcacaaccaactggtgatggttctgtgaatttaacttcagaacaa
cctgttaaaacaagagatggagactctgttatggatacagagaagaatgaatcagctgaa
aataaaaatgataaagagacaaacaatgataacaaaccaaccagtgaacacaataggcct
gaaagccctgataggaggcatgataggaaaagcagagagagggaccgagatagggaacat
aaacgagaaaaggaaagggaacttgaaagatatgaaagagaagcagagcgggaacgcatt
cggaaagagagggaacaaagacgaaggattgaggaggctgagcgtcagtatgaagcatat
ttgaaggattgggagtatagagaaagagagaaagagaaagaacgcctgtatgaaaaagag
aaggagaaggaaagggagcgtaaaaggagaaaggaaatactttatgatgaagaggatgag
gatgaggattctaggaagaggtggcgcagaagtgtgctagaggataagagaaagaagagg
ctgcgtgagaaggaagatgacctagctgacagacaaaaagaagaggaagaaattgctgaa
gccaagaaaaaggctgaggaggaacagaagcagcaaagagatgcattaaagctattagct
gagcatgttgtaaatggtgttaatgaaaatatggctactgaaaagattactgatgaggtc
agaagcattgttgctgaacaagatactatggctgattataatagtcgtgaagatcatatt
ggtgatggtcattcactaaatgtcatcaatgatgactcaaccatagcatctgttgctcca
actgatacacagtcaattgggaatgctcctacaaagaaattggggtttggtctagttggt
tcaggaaaaagaacaactgttccttctgttttccatgaagaggaggatgatgaagcacac
aaggacaaaaaaatgaggccattggttccaattgattactcaactgaagaattgcaggct
gttcaacctacagtttctggtccaacaccaccaaatttggttgcagctgcagaatttgca
aagcgcatatccagtacaaatttcaaggaagagaaggtagatggagaacgggatagaagt
aggcgttcaaatgaaaagtctaaccaccgggacagggacaggagtgatgaagatagtact
cacaacagagatgaaaacaaggagagaattcctgatcgtgacagggatcgagatcatgga
tcggagaaacttaagacttcggataacaagaggcttttggatgcaaaacaattgatcgat
atgataccaaagaccaaggaggagttgttctcatatgagatagactgggcagtttatgac
aagcatcaattacatgaaagaatgagaccgtggatttcaaagaaaatcaaagagtttttg
ggagaagaagaaagcacattgatagactatattgtttccagtacacaagaacatgtgaaa
gcatctcaaatgcttgagcgtcttcagatcattttggatgaagaggctgaaatgttcgtt
ctgaaaatgtggaggatgcttatctttgaaataaagaaggtagagacagggctagctttg
aggtcaaaatcatga
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