Cajanus cajan (pigeon pea): 109807594
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Entry
109807594 CDS
T04868
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 2
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109807594
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109807594
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
109807594
NCBI-ProteinID:
XP_020225732
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Position
11:complement(33112713..33132181)
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AA seq
565 aa
AA seq
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MGNNIYDGQILAEKLSKLNNSQQSIESLSRLCISHRKRAKEIVETWDKLFSSSQKEQRIS
FLYLANDILQNSRRKGSEFVNEFWKVLPAALRHVYDSDEHGKKVVTRLIDIWEDRKVFGS
RGQGLKDEILGKNLLPSSTTQGLKDEIMGKNPLPSSTSNGKSSNPIKIVKRDAHSVRLKL
AVGCLPEKILMSLHSVHDEHINEEAALNKCIAVVHQVGKLVEDAENTLAQGNQLGSTLIN
DLKEQENELKQYIVQLENAEGARATLLSQLKDALQEQETRQELVHTRLLAAQGQVEQAAS
IRKRFTRAPEATRALEQNLPSVHPNSNPLQPSFTQPSISFAPLQTTEEDKKAAAAAVAAK
LAASTSSALMLTSVLSSLVAEEAASMNGSLNSTGFASGLPIYNPEKKPKLDKQLSVSEVN
STDTGSSSFFSTLQPPSVANVPLTQSTNLQPLSQPNQQAAFTSGPPPPPHSPVNPPANHY
VQSTGLMVGGIPYAYGSNNLPPPPPLPPHVAIGLSRPNTQPSQAQQVPPQQQQQPSSTGG
FYRPPGIGFYGQSHSSTQPTPVPRQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaacatatatgatgggcagatattagcagagaagttgtcgaaactcaacaat
tcgcaacaaagcattgaatcattatcccgtttgtgtatttctcaccggaagagagctaaa
gaaatagttgaaacatgggataaactgttcagctcttcccagaaggagcagcgtatctct
tttctatacttggctaatgacatcttgcaaaatagtaggcggaagggcagtgagtttgtt
aatgaattctggaaagttcttccagcagctctcaggcatgtttatgacagtgatgaacat
ggaaagaaagtagtaacgagacttattgacatttgggaggataggaaggtttttggttca
cggggtcagggtcttaaggatgaaatattgggtaagaatctccttccatcatctacaact
cagggtcttaaggatgaaataatgggtaagaatccccttccatcatctacaagcaatggg
aagagttccaatcctatcaagatagtgaagagggatgcccactctgtgagattaaaactg
gctgttgggtgtttgccagagaaaatattaatgtcattgcattctgttcatgatgaacat
attaatgaggaagctgccttaaacaaatgcattgctgttgtacatcaagttggtaaactt
gtagaagatgctgaaaatacgttggctcaaggaaatcagctgggttccacattgataaat
gacttgaaagagcaggaaaatgaacttaaacaatatatagtacaacttgaaaatgctgag
ggtgccagggctactttgctttcccagcttaaagatgcactgcaggaacaggaaacaagg
caagagcttgttcacacccggttgctagctgcacaaggtcaggttgagcaagcagccagt
atcaggaagaggtttacccgagcaccagaagccactagggcattggagcaaaatcttcca
tcagttcatccaaacagcaatcctcttcagccttcttttactcaaccttctatatctttt
gctcctctccaaaccactgaagaagataagaaggcagcagcagctgctgttgctgctaag
cttgctgcctctacatcctctgcccttatgcttacatctgtcctttcttcccttgttgct
gaagaagctgcctccatgaacggtagcttaaattctaccggctttgcttctggattacct
atttacaatccagagaagaaacccaagcttgataaacaattgtctgtttctgaggttaac
agtactgatacagggagctcttcttttttcagtactttgcaaccaccatcagtggcaaat
gtgccactgacacaatcaaccaacttgcaacccttgtcacaacccaatcaacaagctgca
tttacttcaggccctccaccccctcctcattccccagtgaacccaccagcaaatcattat
gttcaatctactggattgatggttgggggaattccttatgcatatggatcaaacaatcta
ccacctccacctcctttacctccacatgttgcaatagggttatcgaggcccaacactcag
ccatcacaggctcagcaagtgccgccgcagcaacagcagcagccatcatcaactggagga
ttttacaggccacctggcataggattttatgggcaaagccattcatcaacacaaccgaca
ccagtacctaggcagtga
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