Cajanus cajan (pigeon pea): 109816416
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Entry
109816416 CDS
T04868
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109816416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109816416
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109816416
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109816416
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109816416
PBAF complex
109816416
GBAF(ncBAF) complex
109816416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
109816416
NCBI-ProteinID:
XP_020237021
LinkDB
All DBs
Position
2:complement(7833635..7836017)
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AA seq
468 aa
AA seq
DB search
MNNNNNNNTNPSSSSFPTGYPHSQSQMAPAQYPISQAHAIVQAQFQAQLQAHGLTFNPTA
KRFPPKPPAPFKPVELLPTARRKRPKPNEKHLPEKASAILPESALYTQLLDLEARLDAAL
ARKKVDIHEALKNPLCVQKTLRIFVFNTFSNQNRSEPPTWTLKIIGRVLDDGEDPDHPGF
FQRPSPYPKFSAFFKRVTISLDKRLYPDSNIITWENSRSSATHEGFEVKRKGDQEFSAQI
RLEMNYSPEKFMLSPALREVLGVQVDTRARIVSAIWHYVKARKLQNQSDPSFFHCDQPLQ
NVFGEDKVKFSMVSQKISHHLFPPQVILLEHKIVLSGSSPVGSACYDVMVDVPFPIQREL
SALVANVDKNREVDACDESICGIIRKIHEHRRRRAFFVGFSQSPLEFIKALVESQNKDMK
ILVGESGSGHNADKERKSDFFKQPWVDDAIVRFLNRKPAVGSNVPGST
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacaacaacaacaacaccaacccctcctcctcctccttccccaccggatac
ccacactcccagtcccagatggcgccggcccagtaccccatctcccaggcccacgccatc
gtccaagcccagttccaggctcagctgcaagcccacgggctcactttcaacccaaccgcc
aaacgcttccctcccaaaccccccgccccgttcaagccagtggaactcctccccacagcc
cggcgaaagcggcccaagcccaacgagaaacaccttccggagaaagcctcggcgattctc
cctgaatccgcgttgtacacgcagcttctcgacctggaagcccgtttggacgccgccctc
gccagaaaaaaagtggacatccacgaagccctcaagaacccactctgcgtccagaaaacc
ctaaggatcttcgtcttcaacaccttctccaaccagaaccgctccgagccccccacgtgg
acgctcaagatcatcggaagggttttggacgacggcgaagaccccgaccacccagggttc
ttccagaggccttcgccgtaccccaaattctctgctttcttcaagagagtgacgatttcc
ctcgacaagaggctttatcccgatagcaacatcatcacgtgggagaattcgcgctcctcc
gccacccacgagggtttcgaagtgaagagaaagggggaccaagaattctccgcgcagatt
cgcctcgagatgaattactcgccggagaagttcatgctctcgccggcgctgcgcgaggtg
cttggggttcaggtggacacgcgggccaggattgtttccgcgatatggcattatgtgaag
gccaggaaactgcagaaccagagtgatccttcgttctttcactgtgatcagcctcttcag
aatgtgtttggggaggataaggttaagttttccatggtttcgcagaagatttcgcaccat
ttgttccctcctcaggttatacttttggagcataagatcgtgctctctgggagtagccct
gttggatctgcttgctatgatgttatggttgatgttccttttcccattcagagggagttg
tctgctttggtggctaatgtggacaagaacagagaggttgatgcttgtgatgaatccata
tgtggaatcattaggaagatacatgagcaccgaaggaggcgagcgttctttgttgggttt
agtcaatctcctctggagttcattaaggccttggtggaatctcaaaacaaggatatgaaa
attttggttggagaatctggttctggccacaatgctgataaagagagaaaatcagatttc
tttaagcaaccttgggttgatgatgccattgttcgctttttgaatcgcaaaccagccgtt
ggaagcaatgttccagggagcacatga
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integrated database retrieval system
