Ceratina calcarata (carpenter bee): 108625393
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Entry
108625393 CDS
T06061
Name
(RefSeq) integrin alpha-PS2 isoform X1
Organism
ccal
Ceratina calcarata (carpenter bee)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
108625393
NCBI-ProteinID:
XP_017880870
LinkDB
All DBs
Position
Unknown
AA seq
1623 aa
AA seq
DB search
MWFANFFTGLIGLVLIVGSPPWCSDAFNVETKHYAVYRIDSQSMFGFAVSVYRDRVGRGW
AIVGAPEAQTGQESVYRGGAVYKCDIAADDRCSMINFDNKGNNQVRNPNAPGGLSQIDNK
TLQWFGATVSSSLVDGGPIMACAPRYIWFSVSQPKSDPVGNRREPVGTCWVATNNFDDSQ
EFSPCRTRYWGYHRQGSCQAGLGAAISKNGERLFIGAPGSWYWQGQMYSISTAMRLKFVA
SMLFAPEAEGQAFSQPLNSRTRVMFTKEGPATEDDSYMGYSVTTGDFIGNGDSGTAVGVP
RGSDLLGKVILFTSNMTNPRNITGEQMGAYFGYAVASGDVDGDGLDDLIVGAPMYTVPDN
PEMTIETGRVYVIYQGSGPEKFRKVDSRDGESNRGRFGLSLASLGDIDRDGYGDFAVGAP
YGGLRGRGAVYIYHGSPTGVLEKYSQVIDAENLDVPIRTFGFSVAGGLDLDGNRYPDLVV
GAYDSGAAVFFRSRPVIKMDSYVSFDQESKLISLSDPNCTLSDGSRVTCFPLKACFKYTG
EGVFARHNFNIQYVLDVKKTKSPRLFFLELEGRNMMNRTIIVEKDQQFCRTVQVYVTPNI
RDKLTSLDAEMRMSLDEERYEDNRARDPKIGLRPVLGSTTSRKDSLSIRKNCGPDNVCIP
DLQMSVTSNVHKYLLGSGERLKLDVLVENRGEDAFESTYNLQLPAGIDYIKVEKIEVMGV
PVQCSAPKQSNNNTLRCDIGNPLQKNGMVKFRVLLQPVTSHGMKPVYEFEMDVNTTNPEN
PNTIGDNQYSLKLPIWIETNLRIDGESKPKDLYYNPDNYTSEVNVTTEAEFGPAMTHNYT
IRNQGPSDVVEAEAFLVWPAQTLAGNELLYLLEQPETSGPIACEPANANYLSLKLEQRKR
LYHHSDPSGVILDESPSGRTINVQRGFEVDKSKLQKEVEIHTGDSSDVQKSRHSSSSSTK
VITSETNRFQLSNTGNEPNVLITTYTQNTSGTGSVSTGDLSAGNRGVIFHTESGGYSDTL
GSGFRPTDSSSTLGMRVPGYESHGTRVNQSFEARWGEASVSRDRTFQSGTTEANVNYSDD
RRHQELLRRQQEEQRVRQEEEARLEHLRKKNEMLAVQRQREEQERLYYQRQQETELRRKQ
EEERRRQEAEARRLEEERRVEQAEIRRQEEEKRREEQAEIRRQEERTRLEEERRYGSSSM
GHQVTESGIVTGNREETVRGGEFGFQLRNVTSTQELERLFGSLSQSASGYELYNRQGKHF
VQFMSRFRTSADRRDYIEFQDGSVFPLQDRSGGPSYVSDASEGRDSRFLKTEGELLVDSS
GKGFIVLKDGRRFPLQGSFSYSEERTYNIPQSGYESKDYSTSWNEEPGQENVEKEYESRY
SSTHEERRTEDRRVTSRIYGRDNHENLNEDEEPFGDSNTYEKSRYKRESDMVDVNEFIKF
ERLHRKPRDLENDPFLSQGSLESGKEPENTLKSLGSGSPCDSVKCVTLRCVLGPLKKDQE
VWIAARYRVDARTLNKAVPQEKVRVSTKLVARVTKQPFIGTPAEQVTKSHEIKTNVEPSI
TPSAPDVIPLWVVVLAACAGAIILLLLIFLLYKCGFFKRNRPTDAPERQPLNRNGHFQQG
DDH
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcgcgaattttttcacaggcctgatcggcctcgtcttgatcgtcggttcgcca
ccctggtgctccgatgcgtttaacgttgaaacgaaacactatgcggtttacagaattgac
agccagtccatgtttggatttgccgtctcggtgtacagggacagagtcggcagaggatgg
gcaatcgtcggtgcgccggaggcacagactggtcaagagagcgtatatagaggcggtgct
gtctacaagtgcgatatcgcggccgatgatcgctgttcaatgatcaacttcgacaataaa
ggaaataaccaagttcgaaatccgaacgcgccgggtggcttgagccagatcgataataag
accctgcagtggttcggtgccacggtttcgtcttcgttggtggacggaggacccataatg
gcgtgcgccccgagatacatctggttctcagtgtcccagccgaagtccgatccggttggc
aatcgaagggaacccgtaggcacctgctgggtggccaccaacaacttcgacgattcgcag
gagttttcaccttgtcgaactaggtactggggataccatagacagggttcctgtcaagcc
ggcttgggcgctgctatctctaagaacggtgagaggctcttcatcggggcgccaggcagt
tggtactggcaaggtcaaatgtactcgatcagcaccgctatgaggttgaagttcgtagcg
tcgatgttgttcgcccctgaagcagaaggccaagcgttttcacagccgttgaacagtcgt
acgagagtaatgttcacgaaggaagggccggccactgaggacgatagctacatgggttac
tctgtcacgaccggggattttattggaaacggtgacagcggcaccgccgtcggcgtacct
cgtggctccgatctcctcggcaaggtcattctcttcacctcgaacatgacgaatcctcgc
aatatcaccggggaacaaatgggcgcttatttcggttacgccgttgcttccggtgacgtc
gacggcgatgggttggacgatctcatagtcggtgcgcctatgtacacggtgccggataac
ccggaaatgaccatcgaaaccggaagggtctatgtgatctatcaaggcagcggacccgaa
aaattccgcaaagtcgattctagagacggggagagcaaccgaggacgattcgggttgtca
ctagcctcgctcggggacatcgaccgtgacggctacggcgacttcgcggtgggtgctcct
tacggtggtctacgaggtcgcggagcggtgtacatctaccacggttcgccgaccggcgtg
ctggaaaaatattcccaagtgatcgacgctgagaatctcgacgtgccgattcgcactttc
ggattttccgtggccggcggcctcgacctggacggaaatcgttatcccgatctggtggtt
ggcgcctacgattccggcgccgctgtgttcttcagatctcggccggtgatcaagatggac
tcctacgtgtccttcgatcaagaatcgaaactgatttcactgagcgacccgaattgcacg
ttgtcagacggaagcagagtcacttgcttccccttgaaagcttgtttcaaatataccggc
gaaggggtcttcgcgaggcataattttaacattcaatacgtgctggacgtgaagaagact
aaaagtccaagactgttcttcttggagctcgaaggaaggaacatgatgaatcgcacgatc
atcgtggagaaggatcagcaattctgtcgcacggttcaggtgtacgtgacgcctaacatt
cgcgacaagctgacgtctctggacgcggagatgagaatgagcctcgacgaagaacggtac
gaggacaaccgagcgcgagacccgaagatcgggcttagacccgttctcggctcgacgacg
tccaggaaggactctctgtccatcagaaagaactgcggccccgacaacgtgtgcattccg
gatcttcaaatgagcgtgacatcgaacgtgcacaagtacctgctgggctccggcgaacgt
ctcaagctagacgttctagtggagaacaggggcgaggacgctttcgagtcgacatacaac
ttgcaactaccagccggtatcgattacatcaaagtggagaagatcgaggtgatgggtgtg
cctgttcaatgttcggcgccgaaacagtcgaacaacaacacccttcgctgcgacatcggc
aatccgttgcaaaagaacggaatggtgaaattcagggtgttgttacagcccgtcacgtcg
cacggtatgaaacctgtgtacgaattcgaaatggacgtgaacactactaacccggagaat
ccgaacacgatcggagacaatcagtactctctgaaattgccaatttggatcgagacgaat
ttgcgcatagacggcgagagcaaaccgaaggatttgtattacaatcctgataattatacc
agcgaggtgaacgtcactacggaggcagagttcggaccggctatgacccataattatacg
attaggaaccaaggtccatcggacgtcgtcgaagcggaagcttttctcgtttggcctgcg
caaaccttggctgggaacgagttactgtatttgctggagcagcctgagacttctggacct
atagcttgcgagcctgcgaacgcgaattacctgagcttgaagttggagcaacgtaaaaga
ctgtaccatcactcggacccgtctggagtaatcttggacgagtccccgtcgggcaggacg
atcaacgtgcaacggggattcgaggtggacaaaagtaaactgcagaaggaagtggagatc
catactggagacagttcggacgtccagaaatctcgtcactcgtcatcgtcgtcaaccaaa
gtgatcactagcgagacgaatagatttcagttatccaacacggggaatgagccaaacgtc
ttgatcacgacctacactcagaacacttcggggactggctccgtgagtaccggggatttg
agcgccgggaacagaggagtgatcttccacacagagtccggtggttacagcgacactctc
ggcagtggtttccggcccacggatagcagcagtactctgggaatgagagttcctggttac
gagagtcacggaacacgcgtgaatcagagttttgaggctcgctggggcgaggccagcgtt
tctagagatcgcacgttccaatcgggcacgaccgaagctaatgtgaactacagcgacgac
agaagacaccaagagttattaagaaggcagcaagaagaacaacgcgtcagacaagaagaa
gaggctcgactggagcatctgaggaaaaagaacgagatgctggccgtgcaacggcagaga
gaggagcaggaacgtctgtattatcagaggcaacaggaaacggaactgagaaggaaacaa
gaggaagagcgaaggaggcaagaggcagaggctcgaagactggaggaagaaaggagagta
gagcaagcagagattcgaagacaggaggaagagaaaaggagagaggagcaagcggagatt
cgaagacaggaggaaaggacaagattggaggaggagaggagatacggtagttcttctatg
gggcatcaagtgacggagagcgggatcgtcactggtaatcgggaagagactgttcgggga
ggagagttcgggttccagttgcgtaacgtcacttccactcaggaattggaaagattgttc
ggttctctgtcgcagtctgcgagcggttatgagctgtacaacagacaaggcaaacatttc
gttcagttcatgtcaagattcagaacttcggccgataggagagattacatcgaattccag
gacggttctgtgttccctcttcaggatcgttccggaggtcctagttacgtctctgacgcg
tccgaggggagagacagcagatttttgaaaacagagggtgagcttttagtcgattctagt
ggaaagggtttcatcgtattgaaagacggcaggaggttcccacttcagggttctttctcc
tactctgaagaacgaacttataatattccacaatcgggctacgaatcgaaggattacagc
acgtcgtggaacgaagagcctggtcaagagaacgtagaaaaggaatacgagtctagatat
tctagcactcacgaagaaaggcgaacggaagatcgaagagtgaccagtagaatttatggc
agggacaatcacgaaaatttgaacgaggacgaagaaccgttcggggattcgaacacgtac
gagaaatctagatacaaacgggaaagtgatatggtcgatgtgaacgagtttataaagttc
gagaggcttcatagaaaacccagagatctcgagaacgatcccttcttgagtcaagggtca
ttggagtccgggaaagaacccgaaaacactcttaaatcgctagggtcgggtagtccttgc
gatagcgtaaaatgtgttacgctgagatgcgttttgggccccttgaaaaaggatcaggaa
gtctggattgcggccaggtacagggtggacgcgaggacattgaataaagccgtgcctcaa
gagaaagtgagagtgtcgactaaattagtggctcgagtcactaagcaaccgttcataggc
acacctgccgaacaggtgaccaaaagtcacgaaattaagacgaacgtcgagccgagtata
acaccatctgcgccggacgttattccactctgggtcgtggtactggccgcctgtgctgga
gccatcatcctgttgctgcttatcttccttctctacaagtgtggattctttaagaggaac
aggcccacggacgccccggagaggcaaccattaaatagaaatggtcatttccagcagggt
gacgatcattga
DBGET
integrated database retrieval system
