Ceratina calcarata (carpenter bee): 108632083
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Entry
108632083 CDS
T06061
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccal01009
]
108632083
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108632083
Protein phosphatases and associated proteins [BR:
ccal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108632083
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108632083
mRNA cycle factors
Stress granule specific factors
108632083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
DUF6591
Motif
Other DBs
NCBI-GeneID:
108632083
NCBI-ProteinID:
XP_017891883
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MLRQQHHAMQNQLRDHSRMGGPMRPMQQASMAPLHQPQHPMPHRNPHQQILSMPPHQQHI
HHIHHPGPPHGNPRQPMLMSMNAHNTNGTMVSVSLNDQANTVSVTLQNPNVQPPQYAQQQ
NSQQNPPPQQQHIQQQQQQIIESNKSVTNEPNSVESRDQNSPNQGHVSVTDSALANMKEK
TPMCLLNELARFNKIQHQYRLTNEQGPAHKKRFTVTLKLGEEEYVAEGPSIKKAQHSAAT
EALTKTWYQRPPPKPTKAMRVGHPGKCFTGAGNLPPTVELNSLAMKRGEATVYTFRQAPP
AGLQQYVSNSYMGHFPRILNPRLPAYNRGFNAEPQLYLVSLKVGEREFIGKGLTGQAARH
DAASKALEQLRQLPLPEEVTNSCNPGENGTMGEPKDPIAELKSPVSLVHEKALKRGLPVS
FEVVSEIGKPHIRTFRTKCTVGDKVTLGEGPSKKVSKRHAAEFMLEELNRLPPLPETIQN
RLVRVKRKPPATKKKSRNLIKVYQEPRSESDAAEEVNPVSRLVQIQQAKREKEPVYNLIE
EKGAPRRREFVMEVTMGQHSAQGMGPNKKLAKRAAAEALLAQLGYSKPQPQPTKPSIKTG
DSESSEQKPRKVTFLEDEQINETQSHQPVGGTIGRQLVPGLLLVDGGQESKLGSGPSVQI
VAEELRGQQQQNPATASPKDQLKYLSQLFNFSVEFNDFPKGAVNKEYLSLVTLSTDPPQV
CHGNGPTRTASRNQAALKALCTLSKLGLDNASNSQTKKDKGASGDGIHISIQVKNNIMDG
AMDK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtcagcaacatcatgcgatgcaaaaccagcttagagatcacagcagaatgggc
ggtccgatgcgtcctatgcagcaggcaagtatggcccctttacatcagcctcagcatccg
atgccgcatcggaacccgcatcaacaaatactgtccatgcccccccatcaacaacatatt
catcacatacatcaccctggacccccacatggaaatccgaggcaaccaatgttgatgagc
atgaatgcacacaatacaaacggcacgatggtcagtgtcagtttgaacgatcaagcaaac
actgtctctgtgactctacaaaatccgaacgtgcagccaccgcaatatgctcagcagcag
aacagtcaacagaatccacctccgcaacagcagcacattcaacaacagcaacaacagatc
atagaatcgaataaatcagttacgaacgaaccgaacagtgtagagtccagggatcagaat
tcgcctaatcaaggtcacgtcagcgtgaccgattcagctttggcaaacatgaaagaaaaa
acaccgatgtgcttgttgaatgagttagcacgttttaataagattcagcatcagtataga
ttgaccaatgagcaaggaccagcgcacaaaaagcgattcacggtaacgctgaagctgggg
gaggaggaatacgttgccgagggtcctagtataaagaaggctcagcatagcgcagcgact
gaagcgttgacgaaaacatggtatcagcgacctcccccgaagcctacaaaggcgatgagg
gtcggccatccgggaaaatgtttcaccggagctggaaacttgccaccgaccgtcgagtta
aattctttggctatgaagagaggcgaagccactgtgtatactttcaggcaagctccgccg
gcaggactgcaacaatacgtttctaacagttacatgggccacttccctcgaatattgaat
ccacgtttgccggcgtataatcgcggtttcaacgcggagcctcaattatatcttgtgtct
ttaaaagtaggagaacgtgaattcatcgggaaaggcctgactggtcaagcagcgcgacac
gatgctgcgagtaaagctttagaacagttgcggcagttgccattgccggaggaagtgacg
aacagttgtaacccaggcgaaaacggtacgatgggcgaaccgaaggatcctatcgcggag
ttgaagagtccggtatcgttggttcacgagaaagctctgaagcgtggtttacccgtgagt
ttcgaagttgtctcggaaattggtaaacctcacatccgaacgttcaggacaaaatgcacg
gtcggagataaagtcacgttaggagaaggaccatcaaagaaggtatcgaagagacacgcg
gccgagtttatgttagaggagcttaatcgtttgccgcctttgccggaaactattcaaaac
cgtttggtacgagtgaaacgtaaaccgccggcaacgaaaaagaagtcgaggaacctcata
aaggtttaccaagagccacgctccgaatctgacgccgcggaggaagttaatccggtttcg
cgattagttcaaatacagcaggctaaacgagagaaggaaccggtctacaatttgatcgaa
gagaaaggcgcgccgaggagaagagaattcgtgatggaagtcactatgggacagcattct
gctcaaggaatgggtccgaataagaaattggctaaaagagccgcggcggaggccctctta
gcgcaattgggttacagcaaaccgcagccgcaacccacgaagccatctattaaaacagga
gatagcgaaagttctgaacagaaacctagaaaagttacctttttagaagatgagcagatt
aatgaaactcaatctcatcaaccagtaggaggaacaatcggacgtcagttggtacccgga
ctattattagtggacggaggtcaagaatctaaactaggtagcggacctagcgtacaaatt
gttgccgaagaactacgaggacaacaacaacagaatccagctactgcttctcccaaagat
cagttaaaatatctttctcaattatttaacttcagcgtggaattcaatgatttcccaaag
ggagcggtaaataaggaatacttgtcgcttgttacgttgagcacggatccaccacaagtt
tgtcacgggaacgggccgacgagaacggcgagccgaaatcaagcagcactgaaagctctg
tgtactttaagtaagctgggtctcgataatgcgtccaattcgcaaacgaagaaagataaa
ggtgcgtccggagatggaatacacattagcattcaagttaaaaataacattatggatgga
gctatggataagtaa
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