Castor canadensis (American beaver): 109682758
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Entry
109682758 CDS
T04791
Symbol
Exosc3
Name
(RefSeq) exosome complex component RRP40 isoform X1
KO
K03681
exosome complex component RRP40
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109682758 (Exosc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109682758 (Exosc3)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109682758 (Exosc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP40_S1
RRP40_N_mamm
KH_6
RRP4_S1
Rrp40_N
Motif
Other DBs
NCBI-GeneID:
109682758
NCBI-ProteinID:
XP_020013784
UniProt:
A0A250YE80
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MAEAVSVVADSPAGGRARAARTVLDQVVLPGEELLLPEQEDVEGPGVAGERPLRLNVGTR
SRLRVVCGPGLRRCGDRLLVTKCGRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGI
VTAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVC
IDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEIIQEVGKLYPLEIVFGMNGRIWVK
AKTIQQTLILANILEACENMTTDQRKQIFARLAES
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctgtgtcggttgtggctgactctcccgcgggcggcagggcacgggcggcg
cgcactgtgttagatcaggtggttctcccgggtgaggagctgctgctgccggaacaggag
gacgtagaaggtcctggtgttgcaggggagcgaccgttgcgcctgaatgttgggacgcgc
tcccgattgcgggtagtgtgcggccctggcttgcggcgctgcggggaccgcctgctggtt
accaagtgtggtcgcctccgtcacaaggagcccggcagcggcagcggtggtggcgtttac
tgggtggattcgcaacagaagcggtatgtacctgtgaaaggagaccatgtgattggcata
gtgaccgctaaatctggagacatattcaaagttgatgttggagggagtgagccagcttct
ttgtcttacttggcatttgaaggtgcaactaaaagaaatagaccaaacgtgcaggttgga
gatctcatctatggccagtttgtagttgctaataaagatatggaaccagaaatggtctgt
attgacagctgtgggcgagccaatggaatgggagtgattggacaggacggtctgcttttt
aaagtgactttgggcttgattagaaagctattagctccagattgtgaaatcatacaggaa
gtgggaaagctctatccactggagattgtgtttggaatgaatggaagaatatgggttaag
gcaaaaaccattcagcagactttaattttggcaaacattttagaagcatgtgaaaacatg
acaacagatcaaaggaaacaaatctttgccagattggcagaaagctga
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