Castor canadensis (American beaver): 109685024
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Entry
109685024 CDS
T04791
Symbol
Trpc6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04022
cGMP-PKG signaling pathway
ccan04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
109685024 (Trpc6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
109685024 (Trpc6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccan04040
]
109685024 (Trpc6)
Ion channels [BR:
ccan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109685024 (Trpc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
XkdW
ING
Motif
Other DBs
NCBI-GeneID:
109685024
NCBI-ProteinID:
XP_020017264
UniProt:
A0A8B7UDJ6
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MSQSPAFGPRRGGSPGAVAGAGARRNESQDYLLLDAELGDDGGAPFPLPPYGYYPSYRGT
ENRLTHRRQTVLREKGRRLANRGPAYMFNDRSTSLSIEEERFLDAAEYGNIPVVRKMLEE
CASLNVNCVDYMGQNALQLAVANEHLEITEILLKKENLSRVGDALLLAISKGYVRIVEAI
LNHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLR
KGARIERPHDYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALEL
SNELAVLANIEKEFKNDYRKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVETCHPGDHGR
PNLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFL
ALIYWCAPCSKIGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDNA
RQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAAS
FIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYA
IAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYI
GAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLL
NMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLKF
KRWTSELFQGHKKGFQEDAEMNKRNEEKKFGIWRSHEDLSKLSLDKKQLAHNKLSSIRSS
EDFQLNSFNNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLE
EKSQNTEDLAELIRKLGEKLSKEPNQEESNR
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagtcccgcgttcgggccccgcaggggcggctctcccggggctgtggcggga
gccggcgcgcggcgcaacgagagccaggactacctgctcctggacgcggagctgggcgac
gacggtggcgcgcccttcccgctgcctccctacggctactaccccagctaccggggcact
gaaaatagactgactcaccggcggcagacagttcttcgtgagaaggggagaaggttagct
aatcgaggaccagcatacatgtttaatgatcgctcaaccagcctatctatcgaggaggaa
cgctttttagatgcagccgagtatggcaacatccccgtggtgcggaaaatgctagaagaa
tgtgcctccctcaatgtcaactgtgtggattacatggggcagaatgcactgcagttggca
gtggccaacgagcacctggaaattacagagattcttctgaagaaagaaaacctctctcgg
gttggggatgccttacttctagctattagcaaaggttacgttcggattgtagaagcaatt
ctcaaccatccagcttttgctgaaggcaagaggttagcaacaagccctagccagtcagag
ctccagcaagatgatttttatgcttatgatgaagatgggacacggttctcccacgatgtg
actcccatcattctggctgcccactgccaagagtatgaaatcgtgcacactctcctgcgc
aagggtgctcggatcgaacggcctcacgattacttctgcaagtgcagtgaatgcaaccaa
aaacaaaagcatgactcgttcagccactccagatctaggattaatgcctacaaaggcctg
gcaagcccagcttatctgtcattgtctagtgaagacccagtcatgacagctttagaactt
agcaatgagctggcagttctggccaacattgagaaagagttcaagaatgactacagaaaa
ttgtcgatgcaatgtaaggatttcgttgttggacttcttgatctctgcagaaataccgag
gaagtggaggccattctgaacggggatgttgaaacgtgccaccccggtgaccacggtcgc
cccaatctcagccgtttaaaacttgccattaaatatgaagtaaaaaaatttgtcgctcat
cccaactgccagcagcagcttctatccatctggtacgagaatctttctggtttacggcag
cagacgatggcagtcaagtttcttgtggtcctcgcagtggccattggtctgcccttcctg
gctctcatttactggtgtgctccgtgcagcaagatagggaagataatgcgtggaccattc
atgaagtttgtagcacacgcagcctccttcaccattttcctgggactgctagttatgaat
gcagctgacagatttgaaggcaccaaactccttccgaatgaaaccagcacagataatgca
agacagctgttcaggatgaaaacatcctgcttttcatggatggaaatgctcattatatcc
tgggtaataggtatgatatgggctgaatgcaaagaaatttggactcaaggtcccaaggaa
tacttgtttgagttgtggaatatgctggactttggtatgttagcaatcttcgcagcatcg
ttcattgcaagattcatggcattttggcatgcttccaaagctcagagcatcattgatgca
aatgacactttgaaggacttgacaaaggtgacattgggagacaatgtgaaatactacaat
ttggccaggataaagtgggacccctcggatcctcaaattatatctgaaggtctttatgca
attgctgtagtgttaagtttctccagaatagcttatattttaccagcaaatgaaagcttt
gggcctttgcagatatcacttgggaggacagtaaaagacatcttcaagttcatggtcata
ttcatcatggtgttcgtggccttcatgattgggatgttcaacctctactcctactacatc
ggagcaaagcaaaatgaagccttcacaacagttgaggagagttttaagacactgttttgg
gctatatttggactttctgaagtgaaatcagtggtcatcaactacaaccacaagttcatt
gagaacatcggttatgtcctctacggagtctacaacgttacgatggtcatcgttcttctg
aatatgttgattgcgatgatcaacagttccttccaggaaattgaggacgatgctgatgtg
gagtggaaatttgcaagggccaaactttggttttcctactttgaggaggggcgaacactt
cctgttcccttcaacctggtgccaagtccaaagtccctgttttatcttttactgaagttt
aaaagatggacttctgagctgttccagggtcataaaaaaggtttccaagaggatgcagag
atgaacaagagaaatgaagagaagaaatttggaatttggagaagtcatgaagacctttca
aagttatcacttgacaaaaaacagcttgcacataacaaactatcaagtataaggagctca
gaagatttccagttaaatagcttcaataatcctccaagacaatatcagaaaataatgaag
aggctcattaaaagatatgtactacaagcccagattgacaaggagagtgatgaagtgaat
gaaggggaattgaaggaaattaagcaggacatctctagtctccgctatgaactcctcgaa
gaaaaatctcagaatacagaagacctagcagaactcattagaaaactcggggagaaattg
tccaaggaaccaaatcaagaggaaagcaatagataa
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