Castor canadensis (American beaver): 109691320
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Entry
109691320 CDS
T04791
Symbol
Poll
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03410
Base excision repair
ccan03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109691320 (Poll)
03450 Non-homologous end-joining
109691320 (Poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109691320 (Poll)
Enzymes [BR:
ccan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109691320 (Poll)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
109691320 (Poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
109691320 (Poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
BRCT_2
HHH
NTP_transf_2
PAG
Flavi_capsid
Motif
Other DBs
NCBI-GeneID:
109691320
NCBI-ProteinID:
XP_020026832
UniProt:
A0A250Y391
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MDPRGILKAFPKRKKIHAHPSSKALAKIPKREEGEEAGEWLSSLQAHIVPTGIGRARAEL
FEKHIVQHGGQICPAQAPGITHIVVDEDMDCERALRLLRLSRLPPGVQLVKSAWLSLCLQ
ERRLVDTAGFSIFIPHRFLDQPQSSKAEQDSSALLGTNDILPRTALSLASLPTGAVSPPT
GDVSPSRKAEEAPSTQVQPSSDDEISDGEGPQVTAADLEALRSGHYPTTPVEDAGPDPAP
EALDKWVCAQPSSQKATNHNLHITEKLEVLAKAYRVQGDKWRALGYTKAIKALKSFHKPV
SSYQEACSIPGVGKRMAEKIMEILDSGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWY
HQGFRTLEDIRSLASLTTQQAIGLKHYDDFLQRMPREEAAEIEQMVRVSALTFNPGLLCI
ACGSYRRGKTTCGDVDVLITHPDGRSHQGIFSHLLNSLRQQGFLTDDLVSQEDNGQQQKY
LGVCQLPGPGRQHRRLDIIVVPYSEFACALLYFTGSAYFNRSMRALAKTKGMSLTEHALS
AAVVRNTQGFKVGHGQVLPTPTEKDVFRILGLPYREPAERDW
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagaggcatcttgaaggcatttcccaagcgaaagaaaattcatgcccatcca
tcgtcaaaagcacttgcaaagattcccaagagggaagagggagaagaagctggagagtgg
ctgagctccctgcaggcccacatagtgcccactggcattggacgagctcgggcagaactc
tttgaaaagcacattgtccagcatggtggccagatatgccctgcccaggctccagggatt
actcacattgtggtggatgaagacatggactgtgagcgggccctccgcctcctcagactg
tcccggctgcccccaggtgttcaactggtgaaatcagcctggctaagtttgtgcctgcag
gagagaagactggtggacacagctggattcagcattttcatcccccacaggttcttagac
caaccacagtccagcaaagcagaacaagactcttctgcccttcttgggaccaacgacatt
ttgcctaggacagccctctctcttgcctctcttcctactggagctgtttctcctcccact
ggagatgtatctccttccagaaaggcagaagaggcaccaagcactcaagtccagcccagt
tcagatgatgaaataagtgatggggaagggccccaggttactgctgctgatctggaagcc
ctaagaagtggccactaccctaccacccccgtggaagatgctgggcctgacccagccccg
gaggccctggataagtgggtctgtgcacagccctcgagccagaaggcaaccaaccacaac
ttgcacatcacagagaagctggaagtgctggccaaagcctacagggtccagggagacaag
tggagggccctgggttacaccaaggccatcaaagccctcaagagcttccacaagcctgtc
agctcctatcaggaggcctgcagcatccctggggttggcaagcggatggctgagaagatc
atggagatcctggacagtgggcacctgcggaagctggatcatattagcgagagtgtgcct
gtcttggagctcttctccaacatctggggagctgggaccaagactgctcagatgtggtac
catcagggcttccggaccctggaagacatccgaagcctggcctccctgactacccagcag
gctattggcctgaagcattacgatgacttcctacagcgcatgcccagggaagaggctgca
gagattgagcagatggtccgggtgtcagccctgaccttcaacccggggctgctgtgtata
gcctgtggctcgtatcgacggggaaagacaacctgtggtgatgtggacgtgctcatcact
cacccagatggccgatctcaccagggcatcttcagccacctccttaacagcctccggcag
caagggtttctcacagatgatttggtgagccaggaggataatggccaacaacagaagtac
ttgggtgtgtgccagctcccaggaccaggacggcagcaccgacgactggacatcattgtt
gtgccctacagtgagtttgcttgtgccctgctctactttactggctctgcctacttcaac
cggtccatgcgggctctggccaagaccaagggcatgagcctgacagaacatgccctcagt
gcagctgtggtacggaatacccaaggcttcaaggtggggcatggccaagtgctgcccacc
cctactgaaaaggatgtctttaggatcttaggcctaccctaccgagaaccagctgagcgg
gattggtaa
DBGET
integrated database retrieval system