Castor canadensis (American beaver): 109694428
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Entry
109694428 CDS
T04791
Symbol
Nr1d1
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
109694428 (Nr1d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109694428 (Nr1d1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccan03310
]
109694428 (Nr1d1)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109694428 (Nr1d1)
Nuclear receptors [BR:
ccan03310
]
1. Thyroid hormone like
1D. Rev-Erb
109694428 (Nr1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109694428
NCBI-ProteinID:
XP_020031935
UniProt:
A0A250Y3D3
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All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MTTLDSNNNTGGVITYIGSSGSSPSRTSPESLYSDSSNGSFQSLTQGCPTYFPPSPTGSL
TQDPARSFGSIPPSLSDDISPSSSSSSSSSFYNGSPPGSLQVAMEDSSRVSPSKSTSNIT
KLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRN
RCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLNSQCQLETSPTQ
HTTSGPMGPSPPPAPAPSPLVGFSQFPQQLTPPRSPSPEPTMEDVISQVARAHREIFTYA
HDKLGTSPGNFNANHASGSPSATTPHRWESQGCPPAPNDNNTLAAQRHNEALNGLRQGPS
SYLPAWHSAPGHHSCHQPNSNGHRLCPTHMYSAPEGEVTANSPRQGNSKNVLLACPMNMY
PHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVR
FASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAV
VLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETSRFTKLLLKLPDLRTLNNMHS
EKLLSFRVDAQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccctggactccaacaacaacacaggtggtgtcatcacctacattggctccagt
ggctcctccccaagccgcaccagcccagaatccctctatagtgacagctccaatggcagc
ttccagtccctgacccaaggctgccccacctacttcccaccatcacccactggctccctc
acccaagacccggctcgctcctttgggagcattccacccagcctcagtgacgacatttcc
ccttcttcttcatcttcatcctcctcctccttctataatgggagccccccagggagtcta
caagtggccatggaggacagcagccgagtgtcccccagcaagagcaccagcaacatcacc
aagctgaatggcatggtgctactgtgtaaagtctgtggggacgtggcctcaggcttccat
tatggagtacatgcctgtgagggctgcaagggctttttccgtaggagcatccagcagaac
atccagtacaaaaggtgtctgaaaaacgagaactgctccattgtccgcatcaatagaaac
cgctgccagcaatgtcgtttcaagaagtgtctctccgtgggcatgtctcgagatgctgtg
cgttttgggcgcatccccaaacgagagaagcagcggatgcttgctgagatgcagagtgcc
atgaacctggccaacaaccagctgaacagccagtgccagttggagacctcgcctacccag
cataccacatcaggccctatgggcccctcaccacctcctgctccagccccttcacccctg
gtgggcttctctcagttcccccaacagctcacaccacccagatcccccagccctgagccc
accatggaggatgtgatatctcaggtggcccgagcccatcgagagatctttacctatgcc
catgacaagcttggcacctcacctggcaacttcaatgccaaccatgcatctggtagccct
tcagccaccactccacatcgctgggagagtcagggctgcccacctgcccccaatgacaat
aacaccttggctgcccagcgtcataatgaggctctgaatggtctacgccagggcccctct
tcctaccttcctgcctggcactctgcccctggccaccacagctgccaccagcccaatagc
aatgggcaccgtctatgtcccacccatatgtactcggctccagaaggcgaggtaactgcc
aacagtccacggcaaggcaactccaagaacgttctgctggcatgtcccatgaacatgtac
ccccatggacgcagtggccggactgtgcaggagatctgggaggacttctctatgagcttc
acgcctgctgtgcgggaggtggtagagtttgcaaagcacatccctggcttccgtgacctt
tctcagcatgatcaggttaccctgcttaaggctggcacctttgaggtgctgatggtgcgc
tttgcatcgttgttcaacgtgaaggaccagacggtaatgttcctgagccgcaccacctac
agcttgcaggagcttggcgccatgggcatgggagacctgctcaatgccatgttcgacttc
agtgagaagctcaactccctggcgcttaccgaggaggagctgggtctctttaccgcggtg
gtgcttgtctctgcagaccgctcgggcatggagaattccgcttcggtggagcagctccag
gagacgctgctgcgggctcttcgggctctggtgctgaagaaccggcccttggagacttcc
cgcttcaccaagctgctgctcaagctgccggacctgcggaccctgaacaacatgcattcc
gagaagctgctgtccttccgggtggacgcccagtga
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