KEGG   Clavibacter capsici: AES38_10100
Entry
AES38_10100       CDS       T05227                                 
Name
(GenBank) DNA repair protein
  KO
K10979  DNA end-binding protein Ku
Organism
ccap  Clavibacter capsici
Pathway
ccap03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ccap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    AES38_10100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccap03400]
    AES38_10100
DNA repair and recombination proteins [BR:ccap03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AES38_10100
SSDB
Motif
Pfam: Ku YL1 TF_Zn_Ribbon DUF5321
Other DBs
NCBI-ProteinID: ALD13222
UniProt: A0AA86GEH0
LinkDB
Position
complement(2141096..2142115)
AA seq 339 aa
MRAIWKGAVTFGLVNVPVKVYSATQDHDVPLHQVHDADGGRIRYQRRCEVCGKVVDYAHI
DKAFDDGDRTVVITEEDLSSLPEERSREIDVVEFVPSDQIDPVMLDRSYFLEPDSSSPKS
YALLRRTLQETDRTAIVHVTLRQRTRLAALRVRGDVLMLQTLLWDDEVREADFPSLDAAP
KVSPRELKMSAQLVEGFAEDFDPSKFSDEYQEQLKTLIDAKLAQGDSLDTDATFGEGDSD
EEDSGGEVLDLMDALKRSIERSRGGASGGRKAPAKKAPARKGKAAASDADDDAPAKTGTA
KKAAAKPRTASKAKSTSANSTAAKKKPAAKKATSERKSA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgagagccatctggaagggcgccgtcaccttcggcctcgtcaacgtgcccgtgaaggtg
tacagcgcgacgcaggaccacgacgtcccgctgcaccaggtgcacgacgccgacggcggg
cggatccggtatcagcgccgctgcgaggtgtgcggcaaggtcgtcgactacgcgcacatc
gacaaggcgttcgacgacggcgaccgcacggtggtgatcaccgaggaggacctctcgtcc
ctccccgaggagaggagccgcgagatcgacgtcgtcgagttcgtgccgagcgatcagatc
gacccggtgatgctcgaccgcagctacttcctcgagcccgactcctcgagccccaagtcg
tacgcgctcctccgccgcacgctgcaggagaccgaccgcaccgcgatcgtgcacgtgacc
ctccgccagcgcacccgcctggcggccctccgcgtgcgcggcgacgtgctcatgctgcag
acgctgctctgggacgacgaggtgcgcgaggccgacttcccgtcgctggatgcggcgccc
aaggtctcgccgcgggagctgaagatgtcggcgcagctcgtggaggggttcgccgaggac
ttcgacccgtcgaagttcagcgacgagtaccaggagcagctcaagacgctcatcgacgcg
aagctcgcgcagggcgactcgctcgacaccgacgcgacgttcggcgagggcgactccgac
gaggaggactccggcggcgaggtgctcgacctcatggacgcgctgaagcggagcatcgag
cggagccggggcggggcatccggcgggaggaaggcgcccgcgaagaaggcgcccgcgcgg
aaggggaaggcggcggcgtccgacgccgacgacgacgctcccgcgaagacgggcaccgcg
aagaaggcggccgcgaagccgaggacggcgtcgaaggcgaagtcgacgtccgcgaactcg
accgcagcgaagaagaagccggccgcgaagaaggcgacgtccgagaggaagagcgcgtga

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