Clavibacter capsici: AES38_10100
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Entry
AES38_10100 CDS
T05227
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
ccap
Clavibacter capsici
Pathway
ccap03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AES38_10100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_10100
DNA repair and recombination proteins [BR:
ccap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AES38_10100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
YL1
TF_Zn_Ribbon
DUF5321
Motif
Other DBs
NCBI-ProteinID:
ALD13222
UniProt:
A0AA86GEH0
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Position
complement(2141096..2142115)
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AA seq
339 aa
AA seq
DB search
MRAIWKGAVTFGLVNVPVKVYSATQDHDVPLHQVHDADGGRIRYQRRCEVCGKVVDYAHI
DKAFDDGDRTVVITEEDLSSLPEERSREIDVVEFVPSDQIDPVMLDRSYFLEPDSSSPKS
YALLRRTLQETDRTAIVHVTLRQRTRLAALRVRGDVLMLQTLLWDDEVREADFPSLDAAP
KVSPRELKMSAQLVEGFAEDFDPSKFSDEYQEQLKTLIDAKLAQGDSLDTDATFGEGDSD
EEDSGGEVLDLMDALKRSIERSRGGASGGRKAPAKKAPARKGKAAASDADDDAPAKTGTA
KKAAAKPRTASKAKSTSANSTAAKKKPAAKKATSERKSA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatctggaagggcgccgtcaccttcggcctcgtcaacgtgcccgtgaaggtg
tacagcgcgacgcaggaccacgacgtcccgctgcaccaggtgcacgacgccgacggcggg
cggatccggtatcagcgccgctgcgaggtgtgcggcaaggtcgtcgactacgcgcacatc
gacaaggcgttcgacgacggcgaccgcacggtggtgatcaccgaggaggacctctcgtcc
ctccccgaggagaggagccgcgagatcgacgtcgtcgagttcgtgccgagcgatcagatc
gacccggtgatgctcgaccgcagctacttcctcgagcccgactcctcgagccccaagtcg
tacgcgctcctccgccgcacgctgcaggagaccgaccgcaccgcgatcgtgcacgtgacc
ctccgccagcgcacccgcctggcggccctccgcgtgcgcggcgacgtgctcatgctgcag
acgctgctctgggacgacgaggtgcgcgaggccgacttcccgtcgctggatgcggcgccc
aaggtctcgccgcgggagctgaagatgtcggcgcagctcgtggaggggttcgccgaggac
ttcgacccgtcgaagttcagcgacgagtaccaggagcagctcaagacgctcatcgacgcg
aagctcgcgcagggcgactcgctcgacaccgacgcgacgttcggcgagggcgactccgac
gaggaggactccggcggcgaggtgctcgacctcatggacgcgctgaagcggagcatcgag
cggagccggggcggggcatccggcgggaggaaggcgcccgcgaagaaggcgcccgcgcgg
aaggggaaggcggcggcgtccgacgccgacgacgacgctcccgcgaagacgggcaccgcg
aagaaggcggccgcgaagccgaggacggcgtcgaaggcgaagtcgacgtccgcgaactcg
accgcagcgaagaagaagccggccgcgaagaaggcgacgtccgagaggaagagcgcgtga
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integrated database retrieval system