Cyprinus carpio (common carp): 109048572
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Entry
109048572 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec23A-like
KO
K14006
protein transport protein SEC23
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109048572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109048572
Membrane trafficking [BR:
ccar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109048572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
109048572
NCBI-ProteinID:
XP_018921756
UniProt:
A0A9Q9WDE2
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Position
46:complement(242710..249527)
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AA seq
767 aa
AA seq
DB search
MSTYQEFIQQNEDRDGVRCSWNLWPSSRLEATRLVVPVSCLYTPLKERPDLPPVQYEPVL
CSRANCKAVLNPLCQVDFRAKIWACNFCFQRNSFPPSYAGISEVNQPAELMPQFSTIEYI
VQRGPPTPLIFLYVVDTCLEEEDLQALKESLQMSLSLLPPNALVGLITFGRMIQIHELSC
EGIAKSYVFRGTKELTPKQIQEMLGLMKPATSGQQGKPLAPHDAAAASCIFLQPVQAVDM
NLTDLLGELQRDPWPVPQGKRPLRSTGIALSIAIGLLEGTFPNTGARVMLFTGGPPTQGP
GMVVGDELKTPIRSWHDIQKDNARHLKKATKYYEALANRAAVNGHSVDIYACALDQTGLL
EMKCLSNLTGGHIVMGDSFNTSLFKQTFQRVFSKDYNGEFRMAFGGTLEVKTSRELKISG
AIGPCVSLNTKGPCVSDNEMGVGGTCQWKICSLTPATTLAMYFEVVNQHNAPVPQGGRGA
VQFVTQYQHSNTQRRIRVTTIARNWADAQSQIQHIESSFDQEASAVLMARLGVFRAESEE
GPDVLRWLDRQLIRLCQKFGQFNKDDQNSFRLSESLSLYPQFMFHLRRSPFLQVFNNSPD
ESSYYRHHFVRQDLTQSLIMIQPILYSYSFYGPPEPVLLDSSSILPDRILLMDTFFQLVI
YHGETIAQWRKAGYQEMAEYENFKQLLQAPLDDAQEILQTRFPMPRYIDTEHGGSQARFL
LSKVNPSQTHNNLYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctaccaagagttcatccaacagaacgaagatcgagatggagtacgctgcagt
tggaacctctggccttccagccgcctggaggccacacggctagtggttcctgtttcctgc
ctctacactccgctcaaagagagaccggacctgcctccggttcagtacgagccggtactg
tgcagccgggccaactgtaaagccgtgctcaacccactctgtcaagtggacttcagagct
aagatatgggcctgcaacttctgcttccagaggaactcttttcctccatcatacgctggc
atttcagaagtgaatcagcctgcagaactaatgcctcagttctccaccattgagtacata
gtgcagcgtggacctccaacccctctcatcttcctgtatgtggtggacacatgtctggag
gaggaagacctccaggccctgaaagaatcccttcagatgtctctgagtctgttgccacct
aatgccctggtgggtctcatcaccttcggccgcatgattcagatccatgagctgagctgc
gaaggtatcgccaagagctacgtcttccgcggcacaaaagagctcacgcccaaacagata
caggagatgctgggactgatgaagccagccacctctggacagcaaggcaaaccactggcc
cctcatgacgctgctgctgcttcttgcatatttctgcagcctgtgcaagcagtagacatg
aacctgaccgaccttctgggggagttgcagagagacccctggcctgttcctcaggggaag
agacctctccgttccacgggcatcgccctttctattgctattggactactggagggcact
ttccctaacacaggggcccgtgtgatgctgttcactggtggccccccaacacaggggccc
ggcatggtggtgggagatgaactgaagacccccatccgctcctggcacgacatccagaaa
gacaacgctcgccatctgaagaaggccactaagtattacgaggctctggcaaaccgtgca
gcagtaaacggacacagcgtcgacatctacgcctgtgcgctggatcagacgggactgcta
gagatgaaatgtctatccaacctcacagggggccacattgtcatgggcgattccttcaac
acgtcacttttcaagcagaccttccaaagagtcttcagcaaagactacaatggagagttt
cgcatggcttttggtggtactttggaagtgaagacctcaagagagctgaagatatctggt
gcgatcgggccatgtgtgtctctcaacaccaaaggaccctgtgtttcagacaatgaaatg
ggtgttggaggaacatgtcagtggaagatttgtagtctcacacctgccaccaccttggcc
atgtattttgaagtagtaaatcagcacaacgccccagttcctcaaggtggaagaggagct
gtccagtttgttacacagtaccagcattcaaacacacagcggcggatccgtgtcaccacc
attgccaggaattgggctgacgcacagtcccagatccagcatatcgagtcgtcatttgat
caggaggcctctgccgttctcatggcccggctcggcgttttcagggcggagtcagaggaa
gggcctgacgttctccgctggctagacaggcagctcattcgcttgtgtcagaagtttggc
cagttcaataaagatgatcaaaactccttcagactgtctgaatctctctcactgtaccca
cagttcatgttccacttgaggagatccccattcctgcaggtgttcaataacagtccggat
gagtcgtcctactacaggcatcatttcgtgcgtcaggatctgacgcagtcgctcataatg
atacagcccatcctctactcctactctttctacggccctccagagcccgttctcctggac
agcagcagcatccttcctgatcgcattctgttgatggacaccttcttccagttggtgatt
taccacggagagactatcgctcagtggaggaaggctggataccaggagatggcagagtat
gagaacttcaagcagctgcttcaggctcctctggatgacgcgcaggagatcttgcagaca
cgcttccccatgcccagatacatcgacaccgagcacggaggttcacaggcccgcttcctc
ctctccaaagtcaacccctcccagacccacaacaacctctacgcctggggccaggagtcc
ggagcaccaatcctcacagacgacgtcagtctgcaagtttttatggatcatctcaagaaa
ctggctgtttccagtgccgcgtaa
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