Cyprinus carpio (common carp): 109049093
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Entry
109049093 CDS
T05134
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109049093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109049093
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
hnRNP proteins
109049093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
109049093
NCBI-ProteinID:
XP_018922311
UniProt:
A0A9Q9UYC3
LinkDB
All DBs
Position
47:complement(10180808..10187525)
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AA seq
375 aa
AA seq
DB search
MAEADRPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPG
DAKDAAREMNGKPFDGKPIKVEQATKPQFESSGRRGPPPSRSRGSSRGLRGSRGTSSREP
FFKGMSSRGPPPLKRGPPVRNGGPPPKRSALSGPMGRLSRDRDPYGPPPRRDSLMSRRDD
GPPHRDDHYSSKDSYSSRDYMSSRDSRDYAPSPRDYPYREYSGHSSSRDDYGSGSRGYSD
RDGYGGGREPRGYMDRPSTGSYRDPYDGYGNSRSAPPSRGPPPSYSGSGGSSRYDDYGSS
SRDGYGGRDSYPSSRSDPYSTSRGDRPGRQERGPPPPLERGYHREYSSSSRGAPRGGGRG
GRPDRGMARNDTEMD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcagaccgaccagggaagctcttcatcggcggcctgaacactgaaactagt
gagaaggtccttgaagcgtatttcagcaagtttggcagaatatcagaagttctgttgatg
aaggatcgtgaaacgaacaaatctagaggctttgcatttgtaacttacgaaaatcccggc
gacgcaaaagatgctgcgagggaaatgaatggaaagccctttgatggaaagcctattaaa
gtggaacaggccacaaaacctcagtttgagtcttcaggacgccgtggtccgcctccatca
cggagtcgtggctcttccagaggtctgcgagggtctaggggaacatcaagcagagaaccc
ttttttaaaggcatgtcatccagagggccaccgccactgaagagaggccccccagtgcgg
aatggaggacccccacccaagagatctgcactgtctgggccaatgggaagattgtccaga
gacagggacccatacggcccccctcctcgcagagattctctgatgtcacggcgtgatgat
ggtcctccacatcgtgatgatcactacagtagcaaagacagttactccagccgtgactac
atgagttcacgggacagtcgagactatgccccgtcaccacgtgattacccataccgggag
tattcgggccattccagttctagagatgactatgggtcgggatccagaggttacagtgat
cgagatggttacggtggaggacgagagcccaggggttacatggatcggcccagtacgggc
tcctatagagatccttacgacggttacggtaactcacgcagcgccccaccctcaaggggt
ccccctccgtcctacagtgggagtggcggaagcagtcgttatgacgactatggcagcagt
tccagggatggatatggcggtcgtgacagttatcccagcagtcggagtgacccgtactcc
actagtcgtggtgaccgtccgggtaggcaggagcgagggccaccccctcctcttgagaga
ggctatcatcgcgaatacagcagctcgagtcgtggggcgcctcgaggtggtggccgcggc
ggtcggccagatagaggaatggcccggaacgatactgagatggactaa
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