Cyprinus carpio (common carp): 109050433
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Entry
109050433 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109050433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109050433
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
109050433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
FOXP-CC
Zap1_zf1
zf-C2H2_4
KAAG1
Motif
Other DBs
NCBI-GeneID:
109050433
NCBI-ProteinID:
XP_018923596
LinkDB
All DBs
Position
5:complement(11206075..11282123)
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AA seq
1432 aa
AA seq
DB search
MEATGHVPSEKKDCKSSALDGNGFSELPKKPSPSSLARGPHHIFPTFHSPIPIDVRHHEG
RYHYEPHALHALHGAAGLAGSPVISDISLIRLSPGASESSFLPPHSYVSPHVEHYLRSAH
SSPTLSMISAARGLSPADVAHEHLKERGLFGLPPPPPGATPADYYHLMAGHRNPYGDLLM
QGAGAGAGAAHLPEYFTPVDVSRFPSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGGISPSFPFPHSINPVAYQHLLSQQRGLSAFGHTPP
LLQPSPMFSSRHPLSLSTLQTPSANDTETRNTTGDSAVSSTVNPLNNKRSKVKTELDGPR
PVSPCSPDHLGGAVDLKXDLDDCKQEAEVVYETNCHWEGCSKEYDTQEQLVHHINNEHIH
GEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHL
RSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKH
VKTVHGPEAHVTKKQRGDLPSRPHPPKENGENEAGTKLSGRTAEEKLEANSTTRGVEDYL
QVKSIKTENSMMYQSSPGGQSSCSSEPSPLGSASHHDGGVELTGLSGGSMGDLSALDDAP
LVDSTVSTGMLGLHLRKNASPAYRLTHLKQEKLKSVRDSCSWANPTPPAPCTKLPPISTG
SLLEGSGGLIDPGLSISSPRLGDLCPGETTVLSQLVERRDSLASTTSSAYTLSRRSSGIS
PCYSSRRSSQTSQPGGRLNNISSAGSYDPISTDLSRRSSEASQCGGLPSLLSLTPAQHYR
LKAKYAAATGGAPPTPLPNMDSMSLRTRMALLGDSHEMATLPIHPPSVPRRCSDTSYANR
SILPHEVTGNITRRASDPVRRVGAEQHSLQQRYNSLSYQSLHPPASSRHFSQINSLSEGN
VNHHPYPPRPPSISENVVLETVASDMDNGLDDAVMLPDDVTHYLTSQNRDSVHHSGTAYR
HHPGQSIHSFGSPQQSHYQRRLALVEANLNAVTSQTAAPSSQQTFPGSPSDTKSQMPVQW
NEVSSGTVDLSHSQTKQGSGRGNPTALQQKQNLSPFQNISSNQQVGLMSHNLTHTAQQNH
VQRNNEFNSQRINQKQPLRPANTEQAKFLYGYHQGSALNDINVGLLSPSGKTLTAQPGSV
QNNRVRASQSNATFPNNQGNYSQMSINQQGYGIPAQNPMLNGNHGLLQPRPPTEPKPYSG
QLSGPTTTAAQQHGYPQSNFSPTYDTSEASSKKSADVGVNSTNTNGIFYTGQIHMFDSSS
LGMADAESAAMAAVGSPERNQVSSTVDSNGAEHPQIDFDAMLDDGDHSSFMSGTLSPTLL
RSLSQNSSRLTTPRNSVTLPPVPAGIGNMAIGDMSSMLTALAEESKFLNMMS
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacaggtcacgttccctcagagaagaaggactgtaagtcgtctgctttggat
ggaaacggcttcagtgagctgcccaaaaaaccttccccatcatccctggccagaggccct
catcacatcttcccgactttccattctccgatccccatcgacgtgcgtcaccacgagggg
agataccactacgagccccatgcgctccacgctctgcacggtgctgcaggtttagcgggc
agcccggtgatctcggacatctctctgatccgtctgtctccgggagcgagcgagtccagc
ttcctcccgccgcactcgtacgtctctccacacgtggagcattaccttcgctcggcacac
agcagccccacgctgtccatgatctcagcggcacgaggactgagtccagccgacgtggct
cacgagcacctgaaggagcgaggtttgttcggtttgccccctccgcctcccggcgcgacc
cccgcagactattaccacctgatggcgggccacaggaacccgtacggagatctgctgatg
cagggggccggagccggggccggagccgctcacctgcccgaatacttcactccggtggac
gtgtcacggtttcccagccctcgtctgacaccgcgcttgagtcggaagcgagctctgtcc
atctctccgctctcagacgccagtatcgacctgcagaccatgatccgcacctcgcccaac
tctctggtggcctacatcaacaactcgcgctccagctcggccgccagcagctcttatgga
cacctgtccgttggaggcatcagtccgtcgttcccgttcccacactccattaatccggtg
gcgtatcagcacctgttgtcccagcagagaggcctcagtgcattcggacacacgccgccg
ctcctccagccgtctcccatgttctccagcagacacccgctgagcctctccacccttcag
acgccctccgccaacgacaccgagaccaggaacacaactggcgactctgcagtcagcagc
acggtaaaccccctgaacaacaagaggtcaaaggtcaagacagagttggatgggcctcga
cctgtgtcgccttgctctccggaccatttgggcggcgcagtggacctgaagngagacttg
gacgactgcaaacaggaggctgaggtggtgtacgagaccaactgccactgggagggctgc
agcaaagagtacgacacgcaggaacagctggtgcatcacatcaataatgaacacatccac
ggggagaagaaggagttcgtgtgccgctgggaggagtgttcgcgcgagcagaagcccttt
aaagcacagtacatgctggtggttcatatgcgcagacacactggagagaaaccacacaag
tgcactttcgagggctgctctaaggcgtactcgcgtctggagaatctgaaaacacacttg
cgctcacacaccggagagaaaccctatgtgtgtgagcacgagggctgcaacaaggccttc
tccaacgcctcggaccgagccaaacaccagaaccgcacacactccaacgagaaaccctac
gtgtgtaagatcccgggctgcacgaagcgctacaccgatcccagctcgctccggaaacac
gtcaaaaccgtccacggccccgaagctcacgtcaccaagaaacaacgcggcgacctgcca
tcccgacctcatccgcccaaggaaaatggagagaacgaagcggggaccaagctttcgggt
cgaacggcagaggagaaactcgaagcaaacagcacgactagaggagtcgaggactatctg
caggtcaagtccataaaaacagagaactctatgatgtatcagtccagccctggtggtcag
tcatcatgtagcagcgagccgtcaccacttggcagtgcctcccaccatgacggtggagta
gagctgacgggactcagtgggggcagcatgggagatctgagcgctctggacgacgcgccc
cttgtggattccaccgtctccacaggaatgttaggccttcatcttaggaagaacgctagc
cctgcttacagactcacgcacctgaagcaggaaaagctgaagtcggtgagggactcgtgc
tcctgggcaaacccaactcctcctgccccctgcaccaagctgccacccatcagtaccggt
tctttattggaaggttctggcggtctgattgatccagggctttccatctccagcccacgc
ctgggtgacctttgtcccggggagacgacggttctgagtcagctggtggagcgccgtgac
agcctagccagcaccacgagctcggcttacaccctcagccgtcgttcatctggaatctcg
ccttgctattccagtcgtcggtccagccagacctcacaacctggtggccgtcttaacaac
atcagctctgccggctcctatgaccccatttccaccgatttgtcaagaaggtccagcgag
gccagccaatgtggaggactccccagtctactcagtctgactcctgcccaacactacaga
ctcaaagccaagtatgctgctgccacaggaggtgctccacccacccctcttcctaatatg
gactccatgagtctgaggactcggatggccctgttaggggattcccatgaaatggccacg
ctccctatccatcccccttcagttcccagaaggtgtagtgacaccagctatgctaaccgt
agcatcttgccccatgaggtgaccggaaacatcactcgaagagcgagcgacccagttaga
agagtaggtgcagagcagcattccctccagcaacgttacaacagcttgtcctatcagtcg
ttacaccctcctgcatccagtcgacacttttcacaaatcaacagcctgtctgagggtaat
gtaaaccaccacccatatccaccccgacctcctagcatttctgaaaatgtggtgctagaa
accgtggcgagtgacatggacaatggtcttgatgatgcagtgatgttgcctgatgatgtc
actcattaccttacatctcaaaatagagattctgtccatcattcagggacagcgtaccgc
caccaccctggacagagcattcacagctttggctccccgcagcagtcccattaccagaga
cgcctagccttggtagaggccaacttgaatgctgtaacaagtcaaactgcagctccgagc
tcccagcagacgtttccaggttcccccagtgacactaagagccagatgccggtgcagtgg
aacgaggtcagttcagggacagtcgatttatctcacagccaaaccaagcagggatcaggg
cggggaaaccccaccgcactccaacaaaaacaaaacctcagcccttttcagaacatcagc
tccaaccaacaagttgggctgatgagtcacaacctcactcacactgcccagcagaatcac
gtgcaacggaataacgagtttaattcccagaggatcaaccagaagcaaccactacgccca
gctaacacagagcaggcgaagtttctgtatggttaccatcagggttctgctttaaatgat
atcaatgtaggtttgctgagtccgtctggtaaaacgctgacggcacagcctggcagtgtt
cagaataacagggtacgagctagtcaaagcaatgccacttttccaaataatcagggaaat
tattcccagatgagcatcaaccagcaaggctatggcattccagcccagaatcccatgctg
aacggaaaccacggactgctacagccaaggccgcccacagaacccaaaccctacagcggg
cagctctcagggccaacgacaactgcagcacagcaacatggttacccacaatccaacttt
agccctacatatgacacctccgaggccagttccaaaaaatcagctgacgtgggtgttaac
agcacaaataccaacggcatattctacactgggcagattcacatgttcgattccagcagt
ctgggaatggcggatgcagagagcgcagccatggccgccgttggctcccctgaaagaaat
caggtctccagcacagtggattcaaacggagcagagcatccacagatcgactttgacgcc
atgctggatgatggcgatcactccagcttcatgtccggaactttaagccccactctcctc
cgcagcctatcccagaattcctctcgtctcaccacgcccaggaactcagtgacattgcct
ccggtaccagcaggaatcggcaacatggccatcggagacatgagctccatgctgactgcg
cttgcagaggagagcaagttcctcaatatgatgtcatag
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