Cyprinus carpio (common carp): 109058649
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Entry
109058649 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109058649
09122 Translation
03013 Nucleocytoplasmic transport
109058649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109058649
03041 Spliceosome [BR:
ccar03041
]
109058649
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109058649
Spliceosome [BR:
ccar03041
]
Complex C
Other components
EJC/TREX
109058649
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109058649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
Thoc2
THOC2_N
Motif
Other DBs
NCBI-GeneID:
109058649
NCBI-ProteinID:
XP_018931393
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
LFQFQSESRQDTKDRMDSLLSCFLSIADQVLLPSLSLMECNACMSEELWGFFKLFPYQHR
YRLYGQWKNETYGNHPLLVKIKAQTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILF
DYILSQIQWYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQ
SLASLCGAVFRKYPIELAGLLQYVTNQLKAGKSFDLLILKEVVQKMAGIEITDEMTVEQL
EAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHELALPLCLLMAQQRNGVVFSEGGE
KHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSVDVLCNQFHTPHDAAFFLSRP
MYAHQILSKYDELKKAEKGNRQQQKVHKYIAACEQIMAPVHEAVVSLHLPKVWDDLRPQF
YATFWSLTMYDLAVPHNAYDREVNKLKMQIKAIDENTEMPLNKKKKEKERCTALQDKLQE
EEKKQLEHVQRVLHRLKLEKDNWLLASESSDHSLSSKFLQLCIFPRCVFSAIDAVYCARF
VELVHQQKTPNFCTLLSYDRVFSDIIYPVASCTENESRRYGRFLCCMLETVTRWHSDRAV
YAKECGNYPGFLTIFRASGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTH
IRNILIVLTKILPWYPKVLNLGQALECRVHKICQEEKEKRPDLYALAMGYSGQLKGRKVH
MVPENEFHQKEQPVRSATSGSLQNGPGNTGKPAVTAATASAGKAEEGAVEDSDKSKDKSQ
AAQKAASKNSTAANKVSSSNGSSTPNSTKGSKEKEDKEKTTKEKKEKKEKNPGSTPEAKA
GGKDKQKEEKPTDSKEKTPKADKDKRKDDKKEEKSKIDGKTAEKEWSKERDVSNDSKTKE
GSKVEKSAGAGSMKSLVPRSEGVESDREQKRRKLDTHSSPSHSSAVKDNLNDFKDSASKH
HPNHSTVLPKSKEKDDEKKESDKSRDRSNEREKKEDRKDRKRDYSNSDREMSQEAKRRKD
ENGMSSSKHSKSASPSESPHSNDKDSSKRSKSTSKDKSDLAKPEKTSGGKKESRHDKEKS
EKKRDSTGAKEEKKHHKSSEKHR
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
ctctttcagttccaaagtgaaagcaggcaagacaccaaggacagaatggactctctgctg
agctgttttctcagtattgctgatcaggtgctgttaccgtctctctcgctcatggagtgc
aacgcctgcatgtccgaggagctctggggcttctttaaactcttcccctaccagcacagg
tatcgcctctatgggcagtggaagaatgagacgtacggcaatcatcctctcctggtgaag
atcaaggctcagacggtcgaccgagccaaatacatcatgaagcgactgactaaggagaac
gtgaagccctcaggaaggcagatcggaaagttaagccacagtaaccccaccattctcttt
gattatattctgtctcagatccagtggtacgataacctcataactccagtggtggactct
ctcaaatacctcacctccctcaactatgatgtgctggcctattgcattattgaagcttta
gccaacccagagaaagagaagatgaaacacgatgacacgaccatttcatcatggctgcag
agtctcgctagtctgtgtggagcggttttcaggaaatatcccatcgagttagctggtctt
ctgcagtatgtgaccaaccagctgaaagcaggcaagagttttgacctgctgatcctgaag
gaggtggtgcagaagatggcaggaattgagatcacagatgaaatgactgtggagcagctg
gaggccatgacaggcggagaacagctcaaagcggagggtggctactttggacagatcagg
aacactaagaagtcgtctcagcgtctgaaggatgctcttctggaccacgagctggcgtta
ccgctgtgtctcctgatggcccagcagaggaacggggtggtcttctctgaggggggagag
aagcatctcaaactcgtggggaagctttatgatcagtgtcatgacactcttgtacagttt
ggtggcttcctggcgtctaacctcagcacagaagactacatcaaaagggtgccgtcagtc
gatgtcctctgcaaccagttccacacgccacacgacgccgccttcttcctgtctcggccc
atgtatgcccatcagattctgtccaagtacgatgaattgaagaaggcagagaagggcaac
cggcagcagcagaaggtccataagtacatcgcggcctgcgagcagatcatggcccctgtg
cacgaggctgtcgtgtctcttcacttgcccaaagtgtgggatgatcttcgtcctcagttc
tacgccactttctggtccctcaccatgtacgacctggcggtgccgcacaacgcctacgac
cgcgaggtcaacaagctgaagatgcagatcaaggctatcgatgaaaacacggagatgcct
ctgaacaaaaagaagaaagagaaggagcgctgcacagcgctgcaggacaagctgcaggaa
gaggagaagaagcagctggagcatgtgcagagagttctgcaccgtctcaaactggagaaa
gacaactggttactcgccagtgagtcctcagatcactctctcagctctaagttcctgcag
ctctgcatcttcccccgctgcgtcttctcagccattgatgccgtttactgcgctcgcttc
gtggagctggtccaccagcagaagacgcccaacttctgcaccctgctcagctacgaccga
gtgttctctgatatcatctacccggtagcgagctgcacagagaacgagtcgcgccgctac
ggccgctttctgtgctgcatgctggagactgtgactcgatggcacagcgacagagccgtc
tatgcgaaggaatgtggcaactatcctgggttcctgactattttccgagccagtggtttc
gacggagggaacaaagccgatcagctggactatgagaatttccggcatgttgttcacaaa
tggcattacaagttgactaaagcgtcggttcactgtctggagacgggcgagtacacccac
atccgcaacatcctgatcgtgctcaccaagatcctaccctggtaccccaaggtgctgaac
ctgggccaggctctggagtgccgcgttcacaagatctgccaggaggagaaagagaagagg
cccgatctctatgcgttagccatgggctactctggccaattgaaaggcaggaaagtgcac
atggtgccagaaaatgagttccaccaaaaggagcagccagtgcgcagcgccacgtctggc
tctctgcagaacggaccgggcaacacgggcaagcctgcggtcactgccgccaccgccagc
gctggcaaagccgaggagggcgccgtcgaggactcagataaatccaaggacaaatctcag
gcggctcagaaagctgccagcaaaaacagcaccgcagccaataaagtgagcagcagcaac
ggaagcagcacgccaaacagcactaaagggagcaaagagaaagaagataaagagaagacc
acaaaggagaaaaaggagaagaaagaaaagaacccaggaagcactccagaggccaaggca
ggagggaaggacaaacagaaggaggagaagcccactgacagcaaggagaagacgcccaag
gccgacaaggacaagaggaaggatgacaagaaggaagagaagagcaagatcgatgggaaa
accgccgaaaaagagtggtccaaggaacgcgacgtgtccaacgacagcaagactaaggaa
ggcagcaaagtggagaagagcgctggggccggaagcatgaagtccctcgtgcccaggtcc
gaaggagtcgagtctgaccgggagcaaaaaagacgaaagcttgacacacactcgtcaccg
tcgcactcctctgcagttaaggacaatctcaacgacttcaaggactcagcttcaaagcac
catcctaaccacagcacagtcctgcccaagagcaaagagaaggacgacgagaagaaagag
tctgacaaatccagggaccgttccaacgagagggagaagaaagaagaccggaaggaccgg
aaacgagactactcaaacagtgaccgcgagatgagccaggaagccaagcgccgcaaagat
gaaaatggaatgagctcctccaaacacagcaagagcgccagcccctccgaatcgccacac
tccaacgacaaggacagcagcaaacgctccaagtccaccagcaaggacaagagcgatctg
gccaaaccggagaagacctctggaggcaaaaaggagtccaggcacgacaaagagaaatcc
gaaaagaagagagacagcactggcgctaaagaagagaagaaacaccataaatcatcagaa
aagcacagataa
DBGET
integrated database retrieval system
