Cyprinus carpio (common carp): 109088383
Help
Entry
109088383 CDS
T05134
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109088383 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109088383 (eftud2)
Spliceosome [BR:
ccar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109088383 (eftud2)
Complex C
U5 SnRNP specific factors
109088383 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
109088383
NCBI-ProteinID:
XP_018958088
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
METDLYDEFGNYIGPELDSDEDEEVDAEDRDADEADEEDDDEDQAEVDEEEGGGGMEVVL
HEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKMKKFTLMEQELPATVYDMEFL
ADLMDSSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDSDLRYTDILFTEQERGV
GIKSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSVRLSDGIVLFIDAAEGVMLNT
ERLIKHAVQEKLAITVCINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDESLI
VSPLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYMEFAKRLWGDIYFNPKTRKFTKK
APNSNSQRSFVEFILEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLV
CNRFFGEFTGFVDMCVQHIPSPQGGAKAKIEHSYTGGLDSDLGETMSECDPDGPLMCHTT
KMYSTDDGVQFHAFGRVLSGTLQAGQPVKVLGENYSLEDEEDSQICTVGRLWISVARYQI
EVNRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSE
LPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPV
VTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQ
TKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPL
CDEPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAP
ADCVSAVYTVLARRRGHVTQDAPIPGSPLYAIKAFIPAIDSFGFETDLRTHTQGQAFALS
VFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLL
ELAKQDVVLNYPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggagacggatctttatgatgagttcggaaactatattggcccagagctggactctgat
gaagatgaggaagtagatgcagaggaccgggatgctgatgaggcggatgaggaggatgat
gatgaagaccaggctgaggttgatgaggaggagggtggtggtggtatggaggtggttctg
catgaggataaaaaatattatcccacagctgaggaagtttatggtcctgaggtggagact
atcgtccaagaagaagatacacagccattgacagagcccatcatcaaacctgtgaagatg
aagaagttcactctgatggagcaagagcttcccgccaccgtctatgacatggagttcctt
gctgatttgatggacagctcagaactgatcagaaatgtcaccttgtgtggacatttacac
catggcaagacttgctttgtggactgcctcattgaacagacgcatcctgaaatccgtaag
agagatgactctgatttacgatacaccgatatcctcttcacagagcaagagaggggagtt
ggcatcaagagtacacctgtaaccatggtgctgcctgactctcggggcaaatcctacctc
ttcaacatcatggacacaccaggtcatgtgaatttctctgatgaggtgacatcatcagtc
agactgtctgacggcattgtgctttttatcgatgctgctgagggggtgatgctgaacact
gagcgactgatcaagcatgcagtgcaggagaagttggccatcactgtctgtattaataaa
gtggatcgtctgattgtggagctgaagctgccccctactgatgcctactacaaactgcgc
cacattgtggatgaggtcaacggcttgctgagcacatactccacagatgagtctctgatt
gtgtctcccctgctggggaacgtgtgtttcgcttcctcacaatacagcatctgcttcact
cttggctcctttgccaaaatctattcagacacttatggtgacatcaactacatggagttt
gccaaaagactgtggggagacatttacttcaaccctaaaacgaggaaattcacaaagaaa
gcccccaacagcaactctcagcgcagctttgttgaattcattctggagccgctgtacaag
attctttcacaggtggtgggggatgtggatacgtctctgcctcgtgtcttggatgagctc
ggcattcacctgactaaagaggagttaaagctcaacatcagacctctgctgcgccttgtt
tgtaaccgcttttttggagagtttacaggctttgtggacatgtgcgtgcaacacatacca
tctcctcaggggggtgccaaagccaagatagagcacagctacacaggtggactggactca
gacctcggagagactatgtctgagtgtgaccctgatggtccactgatgtgccacaccact
aagatgtacagcacagatgatggcgtgcagttccacgcgtttggtcgagtcctgagcgga
accctgcaggcgggtcagccggtgaaggttctgggagagaactacagcctggaggatgag
gaggactctcagatctgcactgtgggacgcctgtggatttctgttgctaggtatcagatt
gaagtgaatcgtgtccctgctggtaactgggtgttgatcgaagggtgcgaccagcctatt
gttaaaacggccacaatcacagagcctcgtggaaatgaagaggctcagatcttcaggcca
ttgaagtttaacacagcgtcggtgataaaaatcgctgtggagccggtcaatccctcagaa
ctgcccaagatgttggatggactcagaaaagtcaacaagagttatccttcacttacaaca
aaggtggaggagtcaggtgaacatgtgattcttgggacaggtgagctgtacctggactgt
gtaatgcacgacctgcggaagatgtactctgagatcgacattaaggtggctgatccagtg
gtgaccttctgtgagactgtggtagagacgtcctccctgaagtgttttgcggaaacgccc
aataaaaagaataagatcaccatgattgctgagccattggagaagggtctggccgaagac
attgagaacgaggtggtgcagatcacatggaacagaaagaagttgggagagtttttccag
acaaagtatgactgggatttgctagcagctcgttcaatttgggcttttggtcctgacaca
accgggcccaacattttagtagatgacactttgccctctgaggtagataaagctcttctg
ggctcagtgaaggacagcattgtacagggcttccagtggggcacacgcgagggtcctttg
tgtgatgaaccaatccgcaacgtgaagtttaagatcctggacgcagtgatcgctcaggag
cctctgcacagaggaggaggacaggtcatccctacagctcgcagagtcgtctactctgcc
ttcctgatggccacgcccaggctgatggagccctattactttgtggaggttcaggcccct
gctgactgcgtttctgctgtgtacacggtgctggcacgcaggagaggtcatgtgacacag
gatgcgccaatccctggctctcctctctacgccatcaaggctttcattcccgctattgac
tcgtttggctttgaaactgatctccgcacacacacgcagggccaggccttcgcgctcagt
gtgttccaccactggcagattgttcccggtgatcctctggacaagagcattgtgattcgt
cctctagagcctcagccggcccctcatctggccagagagtttatgatcaaaacccgcagg
cgcaaaggcttgagcgaggacgtcagtatcagcaagttcttcgatgaccctatgttgttg
gagctggccaaacaagatgtggtgctcaactacccgatgtga
DBGET
integrated database retrieval system
