Cyprinus carpio (common carp): 109102022
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Entry
109102022 CDS
T05134
Name
(RefSeq) AF4/FMR2 family member 2-like
KO
K15194
AF4/FMR2 family member 2
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109102022
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109102022
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
109102022
NCBI-ProteinID:
XP_018970899
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Position
27:complement(15513158..15533581)
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AA seq
788 aa
AA seq
DB search
FFFHQPEPPSTNKWQLDKWLNKVNPHNKALINTQSDSHGLNSSQPDESQSSENQNSSKSK
PSTTLAPADPKERTLLSPIREKAKPKTGQKAPDSKSTKVKSPASVELAPPRRSTGKKQPK
KVERSSSSEEHNWHRPGNSSSTPKEKEPPPLEPPKPRGKAPGVKTAPRKEPRTTTTNTAP
TNITPVLDKKKHRGPSKIIPKSKEFIETESSSSECHSDPEELTKVQLPCPGLNTLSLKSK
DCNSNILNVSSLTSTSSTSIPDPGASDLLEEPLFSPIPIVQNELLSPLRDFEDIKSLWVK
IELSFLSRIPGQDAPEPPPTKAECREVSVKHRRQQSPASIPSRKEPYCNSEQCDVMSGGK
KLRIDKDALLLPPCISPIHNHKSPAQRSEQCDVMSGTKDSLKKQPRKRVDKLLPPLLSPL
SDEPVGRPRRSSECSSLSQEGNTSTVPNTLPSTCTIPTSTSSSSSSSHKHRKGANKSLSH
SKNSTEEDSHSKPSSGFHGNDQSEPDLWSNPSTLSMEHMEPRRPKLTFNNTVHNADYYMQ
EAKKLKHKADALMDKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETVELIRYA
LRLKNFTNHSATIAEKKLDFICNRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKVFLHPQN
SAKSSQAPSPWGANGKSTGTPSPMSLSSSPVSSVSSSTGVMGSSSASGSVAIPQRIHHMA
ASHVNITNNILRSYEHWETAEKLAQESQEFFLELDSVMEPLTQHSSMTELVRYIRQGLHW
LRLEAHLL
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
ttctttttccaccagcctgaacctccatcaacaaacaagtggcagctagataagtggcta
aacaaagttaatcctcacaataaagcactaattaacacccagtcagacagtcatgggctt
aacagctctcaacctgatgaaagccagtcctcagagaaccagaactccagcaagagcaag
cccagcacaacactggcaccagcagaccccaaggagagaacgttgctcagtcctatccga
gagaaagccaaacccaagactggtcagaaggctccagacagcaaaagcaccaaggtgaaa
tcaccagcctcagtggagctagctccccccaggagaagcactggaaagaagcagcccaaa
aaggtggagcgatcctccagtagcgaggagcacaactggcacagaccaggaaactcaagt
tctacgcctaaagagaaagagcccccacctttagagccgccaaaacctagaggcaaggcc
cctggtgtcaagacggctccaagaaaagaacctcggaccaccacaacaaacactgcacca
acgaatatcacaccagttctggataaaaagaagcacagaggaccaagcaagatcatcccc
aagtctaaggagttcatcgagacagagtcttcttcatccgagtgtcattcggaccctgaa
gagctcactaaagttcagcttccctgtcccggtctcaacaccctaagcctgaaatccaag
gattgcaacagcaatatcctgaatgttagtagccttaccagcacaagcagcacctctatt
cctgatccaggtgcctcggatctcctagaagagcccctcttttctcccatccccattgta
caaaatgaacttttgtcaccactaagagattttgaggacatcaagtccctttgggttaag
attgaactcagcttcctgtcacggatcccagggcaagacgccccagagcctcccccaacc
aaggcagagtgtcgggaggtcagtgtaaagcacagacggcaacagtctcctgcctccatc
cctagcagaaaagaaccctattgcaactctgagcagtgtgacgtgatgagtggaggcaaa
aagcttcggatagacaaagacgcgctgctgcttcctccttgtatctcgcccatacacaac
cacaagtctccagcacaaagatctgagcagtgtgacgtgatgagtggcacaaaagattca
ttgaagaagcaacctcgcaagcgggtggataagctgttaccgcctctgctgtcaccgctg
tccgatgagccagtgggccgcccacggaggagcagtgaatgcagctccctcagtcaggag
ggaaacacctccaccgtcccaaacaccctcccctccacctgcacaatacctacctccacc
tcttcatcatcatcctcatcacacaaacaccgcaaaggagcgaacaaatccttgtcccat
tccaagaacagcactgaggaagacagtcacagcaagccgtccagtggttttcacggcaat
gatcagtcggagcctgacctctggtcaaacccttcaaccctgtccatggagcatatggag
cccaggagacctaaactcacatttaataacactgttcacaatgcagattactacatgcag
gaagccaagaagttgaaacataaggcagatgctttgatggacaagttcggcaaagctgta
aattatgccgacggagcgctctcattcatcgaatgcggcaacgccatggaacgagacccg
ttggaggccaagtcaccatacacaatgtattcagaaaccgtagagctcatcaggtacgca
ttgagattaaagaacttcacaaatcattctgccacaatagctgagaagaagcttgatttc
atctgcaatcgctgtttgtcacttctgtacttgcgaatgttcaagctgaagaaagatcat
gcaatgaagtattcccgctcactaatggagtattttaaggttttcttgcacccgcagaat
tctgcaaaaagttcccaagcaccttcgccatggggagccaatggaaagagcacaggtacc
ccgtctcccatgtccctgagttcatctcctgtcagttcggtcagcagcagcactggagtg
atgggctcttcctctgcctctggaagtgtggccattccccaacgcatccaccacatggca
gccagtcatgtcaacatcaccaacaacatcctgcgtagctatgaacactgggaaactgct
gaaaagctggcccaggaaagtcaagagttctttctggagctggactcagtaatggaaccg
ttgacgcagcacagcagcatgacagaactggtgcgctacatacgccaaggactgcactgg
cttcggctggaggcccatttgttatag
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