Cyprinus carpio (common carp): 109108049
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Entry
109108049 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24D-like
KO
K14007
protein transport protein SEC24
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109108049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109108049
Membrane trafficking [BR:
ccar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109108049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
109108049
NCBI-ProteinID:
XP_018976772
LinkDB
All DBs
Position
34:complement(8658407..8689353)
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AA seq
1041 aa
AA seq
DB search
MSQQGYVATPPYSQAQAGMGGYSAGFGNPPPQSHYGAYGSPPQGYSAPPTGVLKPPASSS
SGMPPPPVSSQYGANIQQNGAHPHSFPPPVASAPSMSPYGQPPQSAFHSMAQAPPPTQQL
TNQMSAMNIGGYGQRPMQLPQSPSSSAAPQQFQTSPPPAMGHQPLSPPGQQPSSFGSPPP
MATMGSVAAPPMGMSGPPGPGVHQPPLGPQGYPQQPGSPMSGPYGAQMAGPQMAGPQSGA
FPGGFPGGPAQMAGPPQKKLDPDSIPGTTQVIEDDQAKRGGQVYVTNIRGQVPPLVTTDF
TVQDQGNASPRFMRCTTYSFPSTADLAKQCKVPLAAIIKPFANVPKNETPLYIVNHGEAG
PIRCNRCKAYMCPYMQFMEGGRRYQCGFCSCINEVPVQYFQHLDHMGRRMDLYERPELSL
GSYEFIATLDYCKNNKPPNPPAYIFMIDVSYNNIKSGLVKLICEELKNFGSNFYFKLFLI
NKEEGAETSAIKVGFVTYNKILHFYNVKSALAQPQMMVVSDVAEMFVPLLDGFLVNFQES
RAVINNLLDQIPDMFAETNESETVFAPVIQAGLEALKAAECSGKLFIFQSSIPTAEAPGK
LKNRDDKKLVGTEKEKTLFQPQRGVYEQLTKDCVAQGCCVDLFLFPNQYVDIATMGDVPS
HTGGSIYKYSNFQVEMNGQQFLSDLRRDVEKSIGFDAIMRVRTGTGFRGRQYFRFIYMNN
TTDVEMAAVDCDKAVTVEFKHDDTLSEETGAVMQCALLYTTIGGQRRLRIHNLSLNCSSQ
LSELYKSCETDALINFFAKSAYRAMLNQPLKTVREILVNQTAHMLACYRKNCASPSAASQ
LILPDAMKVFPVYMNSLLKTPTLVGSTELSTDDRAFHRLLVNAMGVEETQVLLYPRLIPL
HTMDVSSEAIPAPVRCSEERLSESGIFLLENGLSMFLWLGQACPPDLIQNLFNVPSLGHL
SSEGPTSLPVLDNAHSRKIHSIISSISQQRATSMKLLIVKQKDRSEMLFRQHLVEDKGLH
GGASYMDFLCYVHREIRQLLT
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcaaggttatgttgccacccctccatactcccaggcccaggcgggaatgggg
ggatactctgcagggtttgggaaccccccacctcagtcacattatggcgcctatggatct
cctccacagggctactctgcccccccgacaggtgtgctcaagcctcctgcctcctcttct
tctgggatgcctccaccaccagtatccagccagtatggtgctaacattcagcaaaatggg
gctcatccccacagtttccctcctcctgttgcttcagctccttccatgtctccttatgga
cagcctcctcaaagtgcttttcatagtatggcacaagccccgcctccaactcaacagctg
accaatcaaatgagtgccatgaacattggaggatatggccaaaggcccatgcagttacca
cagtccccttccagctcagcagcaccacaacagtttcaaacttcaccaccaccagcaatg
ggacatcagcccctttctccaccaggacagcagccgtcctcatttggatctcctcctccg
atggccacgatgggttctgtggcagctccgccaatgggaatgtctggcccacctggacca
ggtgtccaccaaccaccactgggaccccaaggctatccacagcaaccagggagcccaatg
tcaggcccgtatggtgcacaaatggcaggaccacagatggcagggccacaatcaggcgct
ttcccaggaggctttcctggaggtccagcacaaatggcaggccctcctcaaaagaagctg
gacccggactccattccaggcacgacgcaagtgattgaggatgaccaggctaagagagga
ggccaggtgtatgtcacaaacatcagaggtcaggtgcctccactggtcaccacagatttc
acagtgcaggatcaagggaatgccagcccaaggttcatgcggtgcacaacatattccttc
cccagcactgctgaccttgcaaagcagtgcaaagtgcctctggcagccatcatcaaaccc
ttcgccaacgtgcccaaaaacgagactcctctgtacattgtaaatcacggtgaggctgga
ccaatccgctgcaatcgctgtaaggcctacatgtgtccttacatgcagtttatggaagga
ggacgacgctaccagtgtggcttctgcagctgcattaatgaagttccagtgcagtatttc
cagcatttggaccatatggggagaagaatggatctgtatgagagaccagaactgtctttg
ggctcatatgagttcattgccacactggattattgcaagaataataagcctcctaatcct
cctgcctacatcttcatgattgatgtctcctacaacaacataaaaagtggacttgtcaaa
ctaatatgcgaggagctgaagaactttggatctaatttctattttaaattattcctaata
aataaagaggagggagccgagacttcggctatcaaagtgggttttgtcacctataataag
atcctgcacttctataatgtgaagagcgctctggcccagccgcagatgatggtggtctct
gatgtggctgagatgtttgtaccgcttctcgacggattcctcgtcaacttccaggagtcc
cgagctgtcatcaacaaccttttagatcagatccctgacatgtttgctgaaaccaacgag
agtgagactgttttcgcacccgtcatccaagctggtttggaggcactaaaggcagctgaa
tgcagtggcaaactcttcatctttcagtcctccatcccaacagcagaggctccaggaaaa
ctgaaaaacagagatgacaaaaaattagtgggtacagaaaaggagaagactctgttccag
cctcagcggggtgtgtatgagcagctgactaaagactgtgtggcgcagggctgttgtgtc
gacctcttcctgtttccgaaccagtatgtggatatagccactatgggagatgtgccgtca
cacaccggcggctccatctacaagtacagcaacttccaggtggagatgaatggtcagcag
tttctcagtgacctcaggagagatgtggagaagtccatcggattcgatgccatcatgcgc
gtccggactggcacaggctttcgagggcgacagtattttcgtttcatatacatgaacaac
actacagatgtggaaatggcagcagtggactgtgacaaggccgtgacggtcgagtttaaa
cacgacgacacactcagcgaggagactggagctgtgatgcagtgtgctctgctctacacc
accatcggtggccagaggaggctgcggattcacaacctcagtctgaactgtagctctcag
ctgtctgaactctacaaaagctgcgagacagacgccctcatcaacttctttgccaagtca
gcgtatcgggccatgctcaaccagccactgaagacggtgagggaaatcctggttaaccag
acggctcacatgctggcctgctacaggaagaactgcgccagcccctcagcagccagccag
ctaatcctgcctgatgccatgaaggtgtttcccgtctacatgaacagtctgttgaagact
ccgactctagtgggcagcactgagctctccacagacgaccgggccttccacagactcctg
gtcaatgcgatgggagtggaggaaacacaggtcctgctctacccacgcctcatcccgctg
cacactatggatgtgtccagcgaggcgatccctgctccagtgcgctgctctgaggagcgg
ctcagtgagtccggcatcttcctgctggaaaacgggctctccatgttcctctggctggga
caggcctgtccgcccgacctcatccagaacctcttcaatgtgccctctcttgggcacctg
tcctcagaagggccgacatcattacctgtgctggataatgctcattccaggaagatccat
tcaatcatctccagcatttcacagcagagggccacatctatgaagctgctgatagtgaag
cagaaggaccgatcggagatgttgttccgtcagcacctggtggaggacaagggtcttcat
gggggagcgtcttacatggacttcctgtgctacgtgcaccgcgagatcaggcagctactt
acttaa
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integrated database retrieval system
