Cyprinus carpio (common carp): 109108430
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Entry
109108430 CDS
T05134
Name
(RefSeq) protein transport protein Sec24D-like
KO
K14007
protein transport protein SEC24
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109108430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109108430
Membrane trafficking [BR:
ccar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109108430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
109108430
NCBI-ProteinID:
XP_018977130
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Position
34:complement(8550561..8571249)
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AA seq
857 aa
AA seq
DB search
MSQQGYVAAPPYSQAQAGMGGYSAGFGNPPPQSHYGAYGSPPQGYSAPPTGKVCSSPPAS
SSSGMPPPPVSSQYGANIQQNGAHPHSFPPPVASAPSMSPYGQPPQSAFHSMAQAPPPTQ
QLTNQMSAMNIGGYGFVTPFMYLHIAPLASNDVTPAGQLAVSSFLSLARKLKTPLYIVNH
GETGPIRCNRCKAYMCPYMQFMDGGRRYQCGFCSCVNEVPVQYFQHLDHMGRRMDLYERP
ELSLGSYEFIATLDYCKNNKPPNPPAYIFMIDVSYNNIKSGLVKLICEELKTLLDRLPKE
EGAETSPIKVGFVTYNKILHFYNVKSALAQPQMMVVSDVAEMFVPLLDGFLVNFQESRAV
VNNLLDQIPDMFADTNESETVFAPVIQAGVEALKAAECSGKLFIFHSSIPTAEAPGKLKN
RDDRKLVGTEKEKTLFQPLRGVYEQLTKDCVAQGCCVDLFLFPNQYVDIATVGDVPSHTG
GSIYKYSNFQVEVNGQQFVSDLRRDVEKSIGFDAIMRVRTGTGFRATDFFGAVYMNNTTD
VEMAAVDCDKAVTVEFKHDDTLSEESGAVMQCALLYTTIGGQRRLRIHNLSLNCSSQLSE
LYKSCETDALINFFAKSAYRAMLNQPLKTVREILVNQTAHMLACYRKHCASPSAASQLIL
PDAMKVFPVYMNSLLKTPTLVGSTELSTDDRVFHRLLVNAMGVEETQVLLYPRLIPLHTM
DVSSDAIPAPVRCSEERLSESGIFLLENGLSMFLWLGQACPPDLIQNLFNVPSLGHLSSE
GMSLPVLDNAHSRKIHSIISSISQQRATSMKLLIVKQKDRSEMLFRQHLVEDKGLHGGAS
YMDFLCYVHREIRQLLT
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcaaggttatgtcgccgcccctccatactcccaggcccaggctggaatgggg
ggatactctgcagggtttgggaaccccccacctcagtcgcattatggcgcctatggatct
cctccgcagggttactccgcccctccgacaggtaaagtgtgctcaagcccccctgcctcc
tcttcttctgggatgcctccaccaccagtgtccagccagtatggggctaacattcagcag
aatggggcccatccccacagtttccctcctcctgttgcttcagctccttccatgtctcct
tatggacagcctcctcaaagtgcttttcatagtatggcacaagccccgcctccaactcaa
cagctgaccaatcaaatgagtgccatgaacattggaggatatggttttgttacacctttt
atgtatcttcacatagctccactggcgtccaacgacgtaactccagcagggcagctagct
gtctcttcgtttctgtcactagcgcgcaagctcaagactcctctgtacattgtaaaccac
ggtgagactggaccaatccgctgcaatcgctgtaaggcctacatgtgtccttacatgcag
tttatggatggaggacgacgctaccagtgtggcttctgcagctgcgttaatgaagtccca
gtgcagtatttccagcatttggaccatatggggagaagaatggatctgtatgagagacca
gaactgtctttgggctcatatgagttcattgccacattggattactgcaagaataataag
cctcctaatcctcctgcctacatcttcatgattgatgtctcctacaacaacataaaaagt
ggacttgtcaaactaatatgcgaggagctgaagacactgcttgaccgacttccaaaagag
gagggagcagagacttcgcccatcaaagtgggttttgtcacctataataagatcctgcac
ttctataatgtgaagagcgctctggcccagccgcagatgatggtggtctctgatgtggct
gagatgtttgtaccgcttctcgacggattcctcgtcaacttccaggagtcccgagctgtc
gtcaacaaccttttagatcagatccctgacatgtttgctgacaccaacgagagtgagacg
gttttcgctccggtcatccaagctggtgtggaggcactaaaggcagctgaatgcagtggc
aaactcttcatctttcattcctccatcccaacagcagaggctccaggaaaactcaaaaac
agagatgacagaaaactagtgggtacagaaaaggagaagactctgttccagcctctgcgg
ggtgtgtatgagcagctgactaaagactgtgtggcacaaggctgttgtgtcgatctcttc
ctgtttcctaaccagtatgtggatatagccaccgtgggtgatgtgccgtcacacaccggc
ggctccatctacaagtacagcaacttccaggtggaggttaatggtcagcagtttgtcagt
gacctcaggagagatgtggagaagtccatcggatttgacgccatcatgcgcgtccgtact
ggcacaggcttcagggcgacagacttctttggggccgtatacatgaacaacactacagat
gtggaaatggcagcagtggactgtgacaaggccgtgacggtcgagtttaaacacgacgac
acactcagcgaggagtctggagctgtgatgcagtgtgctctgctctacaccaccatcggt
ggccagaggaggctgcggattcacaacctcagtctgaactgcagctctcagctctctgaa
ctctacaaaagctgtgagacagacgccctcatcaacttcttcgccaagtcagcgtatcgt
gccatgctcaaccagccactgaagacggtgagggaaatcctggttaaccagacggctcac
atgctggcctgctacaggaagcactgcgccagtccttcagcagccagccagctaatcctg
cctgatgccatgaaggtgtttcccgtctacatgaacagtctgttgaagactccgactcta
gtgggcagcactgagctctccacagacgaccgggtcttccacagactcctggtcaatgcg
atgggagtggaggaaacacaggtcctgctctatccacgcctcatcccgctgcacactatg
gatgtgtccagcgatgcgatcccggctccagtgcgctgctctgaggagcggctcagcgag
tccggcatcttcctgctggaaaacgggctctccatgttcctctggctgggacaggcctgt
ccgcccgacctcatccagaacctcttcaatgtgccctctctcgggcacctgtcctcagaa
gggatgtcattacctgtgctggataatgctcattccaggaagatccattcaatcatctcc
agcatttcacagcagagagccacatccatgaagctgctgatagtgaagcagaaggaccga
tcggagatgttgttccgtcagcacctggtggaggacaagggtcttcacggaggagcgtct
tacatggacttcctgtgctacgtccaccgcgagatcaggcagctgcttacttaa
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