Cyprinus carpio (common carp): 109108524
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Entry
109108524 CDS
T05134
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109108524
04121 Ubiquitin system [BR:
ccar04121
]
109108524
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109108524
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109108524
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
109108524
NCBI-ProteinID:
XP_018977207
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All DBs
Position
34:16176337..16178655
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AA seq
560 aa
AA seq
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MASRAPSDLVLKKNTTSAVWQYFGFRPNEKGEALNTDEAICKLCNKKVTARDGNTSNLRS
HIRNHHPLTAARMDPSSLSATVSTPPDAGPTASRSTASMQPTIMGAFGKTTKYKRDSVRW
KTCTDAVTKYLAKEMVSFHTVEKKSFKDMVKVLDAQYELPGRKHFSQTAVPHLYSKVRDN
VQVLLSAADSYSLTTDMWSSVNMTPYMSLTVHTITPDWKLESKCLQTTYFPDSHTADNLA
AALRAALQEWQLDEKKLSAITTDNAANISAAIRPLHWPWLNCFGHNLNLAVTNALHDQRQ
KPSAPSDYAVILSGPFHTAGNDCATRWGSKLAMVERILEQAQAIRHVLSDDRRSNLSLTW
QDMDVLKAVHEALKPVALQGQCVGCVRKRPPANKVNKTGILTKLEARYESDSVRKIMRKC
TFLDPRYRGGYETDDNALAETKAELQAEIVRLEAAGPVAIRVEEGMAQPKPSRKKMTLGS
MLQKKADAMAGPVGIGTVEDRVGAEVTAYCLEPVTQGDEDPLLWWKKCCRAFSPDVASGT
KVPVRLCHKHTIGAGFQHPR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcgcgcaccgagtgacctggtcttgaaaaagaacacaacttctgcagtttgg
cagtatttcgggtttcgaccgaacgagaagggagaggcgttaaatacggacgaggcaatt
tgcaaattgtgcaacaaaaaggtgaccgcgagagatggaaatacctcgaacctaaggtcg
catatacgaaaccaccatccactcactgctgcgaggatggacccgagttcgctcagtgca
acagtttcaacacctcccgatgcaggaccaacagcatctaggtccaccgccagtatgcag
ccgacgataatgggggccttcgggaaaacaacaaagtacaaaagggacagtgtccgttgg
aaaacctgtactgatgcagtgacaaaatacttggcgaaggaaatggtctctttccacaca
gtggaaaaaaagtcctttaaggacatggtaaaggtcctagatgcccagtacgagctgcct
ggacggaaacatttctcacaaacagccgtcccacatttatatagtaaagttagagacaat
gttcaagtgctgctgtcagcggcagacagttattccttaacaactgacatgtggtcgtca
gttaacatgacaccatatatgtccctgactgtccacactattacacctgactggaaactt
gaatccaaatgcctccaaactacgtatttccctgatagtcatacggcggacaaccttgct
gctgcacttagagctgcacttcaggaatggcaacttgacgagaaaaaactttcagccata
accactgacaacgctgccaacatttctgccgcaatcaggcccctgcattggccgtggctt
aactgcttcggtcacaatctaaacttggctgtcacaaatgcattgcatgaccagaggcaa
aaaccgagcgcgccctcggactatgccgtaatattgtcggggccttttcacacagctggc
aacgactgcgcaactcgctggggttccaaactggcaatggtggagcgcatcctcgagcag
gcccaagcgatcagacacgtcctgtctgatgacagaaggagcaacctgtccctgacctgg
caggacatggacgtcttgaaagctgttcacgaagcactgaaaccagtcgccctgcaggga
caatgtgttggctgcgtcagaaaacgacctccagctaacaaagtcaataaaactggaatt
ctaacaaagctggaggccaggtatgaatccgattcagtgcgcaaaataatgcgaaaatgc
actttcctcgaccctcgttaccgtggaggatatgagacggatgacaacgcattggctgag
accaaggctgaattacaggctgagatcgtgagattagaggcagcaggtccagtggccatc
agagtggaagagggaatggcgcaacccaaaccctcacgaaaaaagatgactctgggaagt
atgctgcaaaaaaaagccgatgcaatggcaggtcccgtcggcatcggcaccgtagaggac
cgagtcggagctgaagtaacagcctactgtttggagccagttactcaaggagacgaggac
ccacttctctggtggaaaaaatgctgccgggcgttttccccagatgtggcgagtggcacg
aaagtacctgtgcgtctgtgccacaagcacaccatcggagcgggttttcagcaccccagg
taa
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