Cyprinus carpio (common carp): 109110477
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Entry
109110477 CDS
T05134
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109110477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109110477
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109110477
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
COX1
DUF4434
ATP-synt_I
Motif
Other DBs
NCBI-GeneID:
109110477
NCBI-ProteinID:
XP_018979052
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All DBs
Position
36:5104958..5113455
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AA seq
721 aa
AA seq
DB search
MAFKRSSLSKQPQKPPEQALSALESKSLRTNAIRHNGCRAFQYLLNNKIETVFISSLDTS
NGKTALLKALLNLREGENDTIEHLLEIAEKLGDLNILVNAAYTDSFYEGQTALHVAIERR
SAKFVQMLVKKGADVHAKACGKFFQPYQETCFYFGELPLSLAACTNQPDIVDFLMNNPYQ
AVDVRKRDSHGNTVLHALVSIADNSPENTEFVIAMYDHILIKADQLHPKIKLEDIENNEG
LIPLTLAAKTGKLRLLKHIVQREFKGRRHLSRKITEWAYGPVCSSLYDLASLDTYDKNSA
LEIIVYGSEIPNRLEMLHIEPFNRLIEEKWERFAKRMFMFNFIVYVIYLFILTAVAYHRE
AGKDFNNSQSLKPPYPYRKGSEGYLLLTGHIITITGALYFFIRGLIDMLRKRPRFQSLVI
DGYTDQLFFLQAVLFLACALLYCFGNDKYLACLVLCLALSWVNLLYFSRGSKNMGIYSVM
MQKMVLGEICRFLVVYMVFLIGFSAAVVTLFDDRPSKGRTLFLPINGNENCKKPSFQGIY
FTTLELFKFTIGMGDLEFTDQYRYAEVFYVLLIVYIVMTYILMLNMLIALMNQRVDEMSV
ESANIWKLQRAITTLDMEWILPQCLKIKLRSGQEKDLGGGQEPDRRWCFSVEEVNWNQWN
RNLGVITEDPGECLPVSSPTELQREPNQRGLLQTLSKRWTQRQQHRDEQELSPLAEASSS
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaaaagaagcagtctgtcaaagcaaccacagaagcctcctgaacaagctttg
tctgcacttgagtctaaatcactcagaacgaacgctatacggcacaatggctgtagagca
tttcaatatttattaaataacaaaattgaaactgtttttatatcatctttagatacatcc
aatggaaagacagccctgctgaaagcacttttaaatttgagggaaggcgagaatgacact
attgaacatctgctggaaattgcagagaaattgggagatttaaacattttagtcaatgct
gcttacacagacagtttctatgaaggtcagacagcacttcatgttgcaattgaacggaga
agtgcaaaatttgtacagatgctggttaagaaaggggctgatgtccatgctaaagcctgt
gggaaattctttcagccctatcaagaaacatgcttctattttggtgagctgcccttgtcg
ctggctgcttgcactaatcagccagacattgtggacttccttatgaacaacccttaccag
gcggtggatgtcaggaagagggactctcatggaaacacagtgcttcacgcattagtatcc
atagctgataacagtcctgaaaacacagagtttgtcatcgccatgtatgatcacatctta
atcaaagccgaccaacttcaccccaagatcaagctggaggacattgaaaataatgaagga
ctcatcccactcacactagctgccaaaacaggaaaactgaggctgttaaagcacatcgtg
cagcgggagtttaaggggcgtcgacatctgtcacggaagatcacggagtgggcctacggt
ccagtgtgctcgtctctgtatgacctcgcctctctcgacacctacgacaagaactccgcg
ctggagataatcgtttatggcagtgagattcctaatcgcctcgagatgctccatattgag
ccatttaaccgactaattgaagagaagtgggagagatttgcgaaacggatgttcatgttc
aactttatcgtttatgttatctaccttttcatcttaactgcagtagcttatcaccgagaa
gcagggaaggactttaacaacagccaatcattaaagcctccatatccttatagaaaaggt
agcgaaggctatctgcttctgacgggacacatcataactatcactggagcactttacttc
tttataagagggttaatagatatgttaaggaagcgtccaagatttcagtccctggtcata
gatggatacaccgatcaacttttttttctgcaggcagtgctcttcctggcttgtgctcta
ctgtactgctttggtaacgataaatatctggcatgtctagttttgtgtcttgccttgagc
tgggtaaatctactttacttttctagagggtccaaaaatatgggaatctacagtgtcatg
atgcaaaagatggttcttggagaaatctgtcgattccttgtcgtgtacatggtcttcctc
attgggttctcagcagctgtggttactctctttgatgatcgacctagtaagggacggact
ttatttcttcctattaatggaaatgaaaactgtaaaaagccctcatttcagggcatctac
ttcaccactctggagttgttcaagtttacgattggcatgggagatctggagttcaccgat
caatatcgatatgcagaggtcttctatgtgctgctaattgtgtatatagtaatgacttac
attttgatgctgaacatgctgattgctctgatgaatcaaagagtggacgagatgtccgtc
gagagcgccaacatctggaaactacagcgtgcaatcaccaccttggacatggagtggatt
cttccccaatgtctgaagataaagctgcgttctgggcaagagaaggacctaggcggggga
caggagcctgatcgacgctggtgcttcagcgtggaggaagtcaactggaaccaatggaac
agaaacctgggtgtaattaccgaggaccctggggaatgcctgcctgtatcttccccaacg
gaacttcagagagagcccaaccagcgtggactcctgcaaacgctcagcaaacgttggacg
cagagacaacaacacagagatgaacaggagctgagtcctctagctgaggcatctagctcc
gtctga
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