Cynara cardunculus var. scolymus (artichoke): 112500290
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Entry
112500290 CDS
T05604
Name
(RefSeq) probable LIM domain-containing serine/threonine-protein kinase DDB_G0286997
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
PB1
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
112500290
NCBI-ProteinID:
XP_024959502
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Position
LG 17:33965233..33975024
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AA seq
1185 aa
AA seq
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MCCSSPRVLEESLVETEDRQVEMDSPTILTTAPGSATSLNEDHPRLKFLCSFNGSILPRP
QDGKLRYVGGETRIVSVPRDIGFEELMGKMKELFEGASVLKYQQPDEDLDALVSVVNDDD
VTNMMEEYEKLGSGDGFTRLRIFLFSSIEQDDSIHFVDRDERDNERRYVDALNSHNDSPD
FGKQQMGDVQGLAPVDDLQLIEQYYNQLNLDGNIHNHRNFETPMSPVNLGHVRIPHQQSL
NQRYNEMESPWSPAYYSPRHHGSDFPNSPSSSRYHTPYGDPADKCFDRVPPDDYFRQQHV
SHHPQYDQQSLLPENVVWLPPTPISGEKAGFPGNILHGSSMFEGNNVSEHHCSPLLRNEA
PDLNNIGNGFHEVANPSAECPPGRETYMSNVETKFPHSFYGREQNDPRSLYNEAHPHERG
WMLHQSNPRVEEPRSHNPGGGRFSDHYVVDGNGMNITLGNTAYPDGNHATSHYVHHEDRP
RYIRQRPEFCNEIFHDQAMATGSHVHTPHEERGAWHGNFPNTYGAENLYHASSHGHVPVN
AFWRNGQSPMHGHPSYEASGAPQQENGTCNLGYVRTTMESIPRLPVGVENPNPLVDSSPK
VTGYDGGVPDNSYGHALKVTPNASNLEYQHHIPTEPIQLTPAPVQLTPEPVQLMPEPVQL
MPEPMQLTPEPVQLTPASMQLTPPVQLTPDPVRFTLEPIQFTSDLPSCPIPINKVTRSDP
PPTLVDDLLLSVNTLNTEANNNSSNKKSVCKLERDGFGREKLNRDVNVEKSAKLSVSGRE
QKNNPISMVAHGFNRSNCLPAKQIIGAENSHENNGPALRKEELGEPFESVKKAELEGTEE
VKAEAEEDAASAVVNDVKVKEETVQESDAVDAPADLELDSDSDTQTITKIEPTKAEEEAI
ARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADF
WKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLI
IAMDASFGMEYLHGKNIVHFDLKCENLLVNMRDPHRPICKIGDLGLSKVKQHTLVSGGVR
GTLPWMAPELLSGKSHMVTEKIDVYSFGIVMWELLTGDEPYGDMHCASIIGGIVNNSLRP
TIPTWCDPEWKALMGRCWSADPAERPSFSEISQKLRTMAAAINVK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtagtagccctagggttttggaggaatcattagtggaaactgaggatagacaa
gttgaaatggacagtcctacaatattaacaaccgcccccggttcagctactagtttgaat
gaggatcatcctcggttgaagtttttgtgtagcttcaatggtagtatattgcctcgtcca
caagatggaaaacttaggtatgtaggtggagagacaaggattgtgagtgttccgagggat
attggtttcgaagaactgatggggaagatgaaggagttgtttgaaggggcgagtgttttg
aaatatcaacagcctgacgaggatcttgatgctcttgtttctgttgtaaatgatgatgat
gtgacaaatatgatggaggagtatgaaaagctgggttcaggagatgggtttactcggctt
aggatatttttattctctagcatcgaacaggatgattcgattcattttgtagacagggat
gaacgggataatgaaaggagatatgttgatgctttgaacagtcataatgactctcctgat
tttggaaagcagcagatgggtgatgtccaaggactagctcctgtggatgaccttcagtta
atagaacagtactacaatcagttaaatctggacggtaatattcataaccacaggaatttt
gagacgcccatgtcgccagttaacttgggtcatgtaagaatccctcaccaacagtctcta
aaccaaaggtataatgagatggagtccccatggagtcctgcatactactctccaaggcat
catggcagtgacttcccaaattcgccttcatcttctcgttaccatactccttatggtgat
ccagcagacaaatgttttgatagagttcctccagatgattatttcaggcagcagcatgtc
agtcatcatccccagtatgatcagcaatctttgttaccagagaatgttgtatggttacca
ccaacacctatctcaggtgagaaggctggttttcctggtaacatactacacggttccagc
atgtttgaagggaacaatgtcagtgagcaccattgttctcctcttctaagaaatgaagct
ccagacttgaacaacatagggaatggttttcatgaggttgctaatccttctgctgaatgc
cctcctggtagggaaacttatatgtcaaacgtagaaacgaaatttcctcattcattctat
ggcagagagcagaatgatcctcgatctctctataatgaggctcaccctcatgaaagagga
tggatgctgcatcagtcaaacccacgggtcgaggaacctagatcacataacccaggaggt
ggaagatttagtgatcactatgttgtagatggcaatggaatgaatatcactcttgggaac
actgcatatccagatggcaatcatgcgacctcacattacgtccatcatgaggaccgccca
cgctatattcgtcaacggcctgagttctgcaatgagatctttcatgatcaagcaatggct
accggttctcatgtccacactccacacgaggagcgtggagcttggcatggaaattttcct
aatacgtatggggctgagaatctttaccatgcatcatcacatgggcatgtgcctgtaaat
gctttctggagaaacggtcaaagtccaatgcatggacatccttcttatgaagcatcaggt
gcaccacaacaagaaaatggtacatgtaacctaggttatgtcaggactacaatggaatct
atccccaggcttccagtcggggtggagaatccgaatcctttagttgattcctctcctaaa
gtgacaggatatgatgggggtgttcctgataattcttatggccatgctttaaaagtgacg
ccaaatgcttccaatctagagtatcagcatcacataccaactgaacccatccaattgacg
cctgcacctgtgcaattgacgcctgaacccgtgcaattgatgcctgaacccgtgcaattg
atgcctgaaccaatgcaattgacgcctgaacccgtgcaattaacgcctgcatccatgcaa
ttaacgccacctgtgcaacttactcctgaccccgtccgatttactcttgaacccatccaa
tttacttctgatttgccaagctgcccaattcctataaataaagtgacaaggtctgatcca
ccgccaactttggttgatgatttactgctttctgtgaacacgttgaatacagaagcaaac
aataattccagtaataaaaaatctgtctgtaagttggagagggatggttttggaagggaa
aagttgaatcgtgatgtaaatgttgagaaatcagccaagttgtctgtctcaggcagagaa
cagaagaataacccaatttccatggtggcccatgggtttaatagatcaaattgcttacct
gccaagcaaattattggagctgaaaactctcatgaaaacaatggtcctgctcttagaaaa
gaagaacttggggagccttttgagtctgtaaagaaagcagaattagaaggtactgaagag
gtgaaagctgaagctgaagaagatgctgcttctgctgttgtgaatgatgttaaggtcaaa
gaagaaactgtgcaggaatcagacgctgtggatgcacctgcagatttggagttggattct
gacagtgacacccaaaccattacaaagatcgaaccgacaaaggctgaggaagaagccatt
gctaggggcttgcagactataaagaacgatgatttggaggaaatacgggagttaggatct
ggtacttatggagctgtctatcatgggaaatggaagggttcagatgtagcaatcaaaaga
attaaagccagttgttttgctgggaggccatctgaaagagaacgtttgattgcagatttt
tggaaggaggcgctgattttaagttcattgcaccacccaaatgtcgtctctttctatggt
atagttcgtgatggaccagatggctctttggcaactgtgacagagttcatggttaacgga
tctctgaagcagttcttacagaaaaaagacagaactattgatcgccgtaagagacttatc
atagctatggatgcttcttttggaatggaatatttgcatggaaaaaatatcgtgcatttt
gatctaaaatgtgaaaatctacttgtgaatatgagagatccacaccgaccaatttgcaag
attggggatcttggcttatcgaaggtaaaacaacacactttggtgtctggaggtgtgcga
ggaacactgccctggatggcacctgagctgcttagtggcaaaagtcacatggtaacggaa
aagattgatgtctactcattcgggattgttatgtgggaattgcttactggagatgaacct
tatggagatatgcattgtgcttccataattgggggaatcgtgaacaactcattacgtcca
acgatcccaacatggtgtgatcctgaatggaaggccttaatgggaaggtgttggtctgcc
gatccagcagaaagaccatccttttcagaaatttctcagaagttgagaactatggctgca
gccatcaacgtaaaatga
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