Cynara cardunculus var. scolymus (artichoke): 112500521
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Entry
112500521 CDS
T05604
Name
(RefSeq) LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Gene cluster
GFIT
Motif
Pfam:
LRR_1
LRR_8
LRR_4
LRRNT_2
Motif
Other DBs
NCBI-GeneID:
112500521
NCBI-ProteinID:
XP_024959790
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Position
LG 17:5064724..5066675
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AA seq
650 aa
AA seq
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MKALCCLFFLSISIFCFPSLSLSLNKAFAAAITRRHLGSLKDSDPQSDDLEIEIDARLSF
ANPRLKKAYGVFQEWKKVIYSDPDNMISNWEGVDVCSYNGVFCENAPDDPNSVTVAGIDL
NHGDIAGHLVPHIGLLTDLSVFHINSNRFCGIIPTSFSKLTILHELDISNNRFVGPFPSV
VLELPKLKYLDLRFNDFEGQLPPQLFDKDLDAIFLNNNKFSSSIPENIGNSPASVIVFAN
NGFKGCLPKSIGRMTGLEEIIFSNNKLSGCVPEELGMLENITVLDLSNNDFIGTLPKGLE
RLKHVERIDIGQNKLIGKVVDSVCSLPKMVNFSFADNYFDGVEQKCENPMRAEIVINVKK
NCLPNKPNQKSEKKCSSVVNLPIDCETVGCKKPSFDSDEESQRRKPPRRPNPKPKRKRKP
KPVPPPKPSPSPTPVLPTPSPPPPPNQSPPPPVQSPPPPVQSPPPPPPPPPPPPPQSPPP
PVQSPPPPVHSPPPPPPPVQSPPPPVQSPPPPVFSPPPPVPSPPPPVQSPPPPIFSPPPP
PPPVQSPPPXHRXXXXXXSPPPPVHSPPPPPPPVQSPPPPVQSPPPPVFSPPAPSPPPPA
PTQSPPPPSPVFPPPPPPVQSPPPFIDIILPPHIGSRYESPPPPVFQGYG
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttatgctgcctttttttcctttctatttccatcttctgtttcccctcatta
tctctttcattaaacaaagccttcgcggcggcgatcacccgtcgtcacctaggctctttg
aaagattctgatcctcaatccgatgatttggaaattgagatcgatgcccgcttgagtttt
gccaatcctagacttaagaaagcttatggtgtcttccaagaatggaaaaaggtcatatac
tcggatccagataatatgatcagcaactgggaaggcgtagacgtatgttcttacaacggt
gtattttgcgaaaatgcgcccgatgatccaaattcggtcaccgttgctggcattgatctt
aaccatggtgacatcgccggccatttggttcctcatattggcctattaacagaccttagc
gtgttccatataaattcgaatagattttgtgggatcatcccgacgagtttctccaagctc
acgattctacacgagctagatataagtaataacagatttgtaggtccttttcctagcgtt
gtcctagaattgcctaaattgaagtatcttgatcttagattcaatgattttgaaggacag
ttgcctccccaactattcgataaggatcttgatgctatcttcttgaataataacaaattc
tcatcttctatccctgaaaacattggtaattcacccgcttctgtgattgtgtttgcaaac
aatggctttaaaggttgtcttcctaagagcattggacggatgacgggcttagaggagatc
attttctccaataacaagctttctgggtgtgtgccggaggaattagggatgcttgagaac
attacggtcttagatttgagcaataacgactttatagggacacttcctaaaggtcttgaa
agattgaagcatgttgagagaatcgacattgggcaaaataagttgatagggaaggtggtt
gacagcgtttgcagtttgccaaaaatggtgaacttttcgttcgctgataattattttgat
ggtgtggaacagaaatgtgaaaatccgatgagggctgagattgttataaatgttaaaaag
aactgtttgccgaataaaccgaatcagaaaagtgagaagaagtgttcgtcagtggtgaat
ctgccgatagattgcgaaactgtggggtgtaagaaaccgagcttcgacagtgatgaagag
tctcaacggagaaaaccaccacgacgaccaaacccgaagccaaagcgaaagcgaaagcca
aagccagtcccaccaccaaagccttctccatctccaacaccagtactacctacgccttct
ccccctccacctccaaatcagtctccaccaccaccagttcaatcgcctcctccaccagtt
caatcaccaccaccaccaccaccaccaccaccaccaccaccacctcaatcacctccccct
ccggttcaatcaccaccaccacccgttcactctccaccaccaccaccaccaccagttcaa
tcacctcccccaccagttcaatcaccgccaccacccgttttctctcccccaccaccagtt
ccatcaccacccccaccagttcaatcaccgccaccacccattttctctccaccaccccca
cccccacctgtccaatctcctccaccanttcatagacannnnnnnnnnnnnnnntcacca
ccaccacccgttcactctccaccaccaccaccaccaccagttcaatcacctcccccacca
gttcaatcaccgccaccacccgttttctcacccccagctccctcccctccacctcctgca
ccaacccaatcaccacccccaccatccccagtgtttcctcctccaccaccacctgtccaa
tctcctccaccattcatagacatcattctaccaccccacatcggttcacgttacgagtca
ccaccaccaccggtgtttcaaggatacgggtag
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