Cynara cardunculus var. scolymus (artichoke): 112501420
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Entry
112501420 CDS
T05604
Name
(RefSeq) coatomer subunit alpha-1-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112501420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112501420
Membrane trafficking [BR:
ccav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112501420
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112501420
Exosomal proteins of bladder cancer cells
112501420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
ENTH
DZR_2
Motif
Other DBs
NCBI-GeneID:
112501420
NCBI-ProteinID:
XP_024960820
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MLTKFETKSNRVKGLSLHAKRPWILASLHSGVIQLWDYRMGTLIDKFDEHDGPVRGVHFH
ILQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESPWIVSASDDQTVRIW
NWQSRSCLSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLRKKNVSPADDLMN
LSQLNSDLFGGIDVVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRLLKLWRMNDTKAWE
VDTLRGHVNNVSCVVFHSKQDIIVSNSEDKSIRVWDVTKRTGIHTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDSMFYAKDRFLRFYEFSTQKETQVLPIRRPG
STSLNQGPHTLSYSPTENAVLICSDVDGGSYELYIVPKDSISRGDTVQDPKRGAGGSAVF
VARNRFAVLDKSTNQVLVKNLKNEIVKKSGLPITADSIFYAGTGNVLCRAEDRVVSFDLQ
QRIVLGSLQTSFVKYIVWSNDMENVALLSKHSIVVASKKLVHQCTLHETIRVKGGAWDDN
GVFIYTTLNHIKYCLPNGDSGVIRTLDVPIYITKVLGNKIFYIDRDGKNKIIVIDATEYI
FKLSLLKKKYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALDSGNI
QIAVAAAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNIEKLSK
MLKIAEVKNDVMGQFHNALYLGNIRERVSILENAGHLPLAYITASVHGLQDVVERLAAEL
GDLPTLPKGKIPSLLMPPTPVMRGGDWPLLRVMRGIFEGGLENVGKGVPDDEEEVNDADW
GEELDLVDVDGLENGDIQAVLEDREVDEDNDEEGGWDLEDLELPPETDTPKASISSHSSF
VAPSPGMPVSQLWIQKSSLAAEHVAAGNFETAMRLLHRQLGMQNFAPLKSMFIDLHVGSH
SYLRAFSSVPVLSMAVEREWTESAAPNVRGPPALVFNFSQLEEKLKAGYKATTAGRFSEA
LRLLSNILHTIPLIVVESRREVDEVKELIVIVKEYVLGLQMELKRKELKDDPVRQQELAA
YFTHCNLQVPHMRLALLSAMKLSYNARNLNTAANFARRLLETNPTNENQSRTARQVLQAA
EKNLTDSSKLNYDFRNPFVICGATHVPIYHGQKKALCPYCSSNFLPSQEGRLCTVCDLSV
IGMDASGLLCSPSQIR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaaattcgagactaagagtaacagagtgaagggactgagtctccatgcgaaa
aggccatggatccttgcgagtcttcatagtggtgtgatccagctatgggattatagaatg
gggacactgattgataagtttgacgaacatgatggtccggttcgtggtgttcattttcac
atattgcagccgctgtttgtgtctggaggggatgattacaagattaaggtttggaactac
aagttgcacaggtgtctgttcaccctccttggacaccttgattatatccgtactgtacag
tttcatcatgagtctccttggatagtgagtgcaagtgatgatcaaactgttcgaatttgg
aattggcagtcaaggtcatgcctttctgttttaactggtcacaatcattatgtaatgtgc
gcatccttccaccctaaagaagatcttgtcgtgtcggcttcacttgatcagacagttcgc
gtctgggatattggatctttgaggaagaaaaatgtgtccccagctgatgacctgatgaat
ttaagtcagctaaactctgatctttttggtggaattgatgttgttgtgaagtatgttctg
gaaggtcatgatagaggagttaactgggcctcatttcatccaacgttgcctctaattgtt
tcaggtgctgatgaccgtctgctgaagttgtggcgcatgaatgacacgaaggcttgggaa
gtggacacattgagaggacatgtgaataatgtgtcatgcgtcgtatttcacagcaaacag
gatataattgtttccaactcagaagataagagcattcgtgtttgggatgtgacaaagcgt
actggtattcatactttccgaagagagcatgatcgattttggattcttgcatctcatcca
gagatgaatcttcttgcagctggtcatgacagtgggatgatcgtgtttaagcttgaaaga
gagaggcctgccttctctgtaagtggtgattcaatgttctatgctaaagatcgcttcttg
cgattctatgagttctcaactcaaaaggaaacacaagtgcttccaattcgacggcctggc
tccacatctctgaatcagggtccacacactctttcatatagtcctaccgaaaatgctgtc
ctcatatgttcagatgtcgatggcggatcttatgagttgtatattgtacccaaagacagc
atcagcaggggtgacacggtccaagatccaaaaagaggcgctggaggatcagctgtgttt
gtggctcgaaataggtttgcggtgcttgacaaaagcactaatcaagtactagtcaagaac
cttaaaaatgagattgttaaaaagagtggtctgccaataactgctgattccattttctat
gctggaacgggtaatgtgctctgtagggccgaagacagggtggtaagttttgatcttcag
caaaggattgttctaggtagccttcaaacatcttttgtcaagtatattgtctggtcaaac
gacatggaaaacgtagcgttgttgagcaagcattccatagttgttgctagcaagaagctt
gtccaccagtgcacccttcacgagacaatacgtgttaagggtggagcctgggacgataat
ggtgttttcatatacaccaccctgaatcacatcaagtattgcctacccaatggagatagt
ggggtaataaggacccttgacgtccctatatacatcacaaaagttttgggaaataagatt
ttctacatagatcgggatggaaagaacaagattatagttattgatgcaacggaatatata
ttcaagttgtccttactaaaaaagaagtatgaccatgtcatgagcatgatccgaaattca
cagctttgtgggcaagcgatgattgcctatctacagcaaaaggggtttccagaagttgct
cttcactttgttaaagatgagagaactcgtttcaatctggctctggacagtggcaatatt
cagatagctgttgctgcggcgaaggagatagatgagaaggatcattggtatagattgggg
gttgaggctcttcggcagggaaatgcaggaattgtggagtatgcttaccagagaacaaag
aattttgagaggctatcttttctttacttgattacagggaacattgaaaagttgtcaaaa
atgcttaagattgctgaagtcaagaatgatgtcatgggccagttccataatgctctttat
ctgggtaatattcgagaacgtgtcagcattttagagaatgctggccatttacctcttgcc
tacattactgcttcagttcatgggctacaggatgttgttgaacgccttgcagcagagttg
ggggaccttcctacgttgccgaaaggcaagataccttcacttctaatgccacccactcca
gtcatgcgtggtggagattggcccctcttgcgagtcatgagaggcatttttgagggtggt
cttgaaaatgtcggtaagggtgtccctgatgacgaggaagaggtaaatgatgctgattgg
ggtgaagaactagatttagttgatgtggatggtttggagaatggcgatattcaagctgta
ctggaagatagagaagtcgatgaagataatgatgaggagggagggtgggaccttgaagat
ttggaacttcctcctgagacagacactccaaaggcttctataagttcccattcatccttt
gtggccccctctcctggcatgcctgtcagccaactttggatccaaaaatcctctctggct
gctgaacatgtagcagctggcaactttgaaactgcaatgagattgttgcatcggcaactg
ggaatgcaaaactttgcccctctaaaatccatgtttattgatcttcatgttgggagccat
tcttatctacgtgcattctcgtctgttcctgtattgtctatggcagttgaacgggaatgg
accgagtctgctgctcctaacgtgaggggtccacccgcacttgtgttcaacttttcacag
ttggaagagaaactaaaagcaggttataaagccacaacagctggaagattttccgaggcc
cttcggcttttatcaaatattcttcacaccattcctcttattgtggttgagtcaagacga
gaggttgatgaagtgaaggaactgattgttattgtgaaagagtatgttttaggtctacaa
atggagctcaaacgaaaagaactcaaagatgatcctgttcgtcaacaagagcttgctgct
tattttactcactgcaatcttcaagttccacatatgaggctcgcactgctaagtgcaatg
aaattatcttacaacgcaaggaaccttaatacggcagccaattttgccagacggcttctc
gagacaaatcccacaaatgagaaccaatcaaggacagcgagacaagtgttgcaggcggca
gaaaagaatctgactgattcatctaagctaaactacgatttcagaaatccatttgtaatt
tgtggggccactcatgtccccatctatcatggtcagaaaaaagctttgtgcccatactgt
agctccaattttctgccaagccaagaggggaggttgtgtaccgtatgtgatctttcagtg
ataggcatggatgcttcgggcctgttatgttctccctcacagataaggtga
DBGET
integrated database retrieval system
