Cynara cardunculus var. scolymus (artichoke): 112511155
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Entry
112511155 CDS
T05604
Name
(RefSeq) leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_4
LRR_8
LRR_1
APH
ABC1
Pkinase_fungal
LRR_2
Motif
Other DBs
NCBI-GeneID:
112511155
NCBI-ProteinID:
XP_024972402
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Position
LG 4:17133528..17135511
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AA seq
642 aa
AA seq
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MATINHLSLLLFFTLTLSLHANPNLHTADHRALLTILQDLGVSPELRRPDNLCNTAGIFC
ERRISINSHVLKVTGIVFKAQGLRGVLSPAIGELSELKELSFPNNYLVDRIPSQIIECRK
LEVINLRNNRFSGAVSPELSSLLRLRILDLSSNKFSGDLSFLKYFPNLEKLSLADNMFTG
KVPASLRSFRNLRFFNISGNSFLEGPLPALNQLESPLPELKTKRNTNSKRVPKRYIFAES
TNSSSNQNTSSNPNDFQSPAPAPAPAEPPIGSPPKHKPNHKATKKLMGWILGFFAGLLAG
ILSVMIFTVFFKLVFIMLKGGVNQVGPAIFSQLIKAEELAFLENDDGIASLQVIGRGGCG
EVYRTDIPKGRIKTIAIKKVTQPPKDAAELTEEDTKFLNKKMRQIRSEIQTVGQIRHRNL
LPLLAHVSRPNCHYLVYEFMKNGSLQDILEEANNGTRELDWLARHKIAIGIASGLEYLHI
HHTPRIVHRDLKPGNVLLDDDMEARIADFGLAKSIPEADTHMTSSNVAGTLGYIAPEYHQ
TMKFTDKCDIYSFGVLLGVLVMGKLPSDEFFQRTSEISLVKWMKKAITSEDPKQAIDPNL
FENGYEKQMLLVLKIACFCTLDNPKERPSSKECRSMLDQIQH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatcaaccacctctccctactcctcttcttcactctaaccctctcacttcat
gctaaccccaatctccacaccgccgaccaccgtgctctcttaacaattctccaagacctg
ggtgtctcaccggagctccgtcgaccggacaacctctgcaacaccgccgggatattctgt
gaacggagaatttcaatcaattcacatgttcttaaggtcaccggaattgtcttcaaagct
caagggctaagaggggttctctcgccggcgattggggagttgtcggaactcaaagaactg
tctttccctaacaattatcttgttgatcgtatcccatctcaaatcatcgaatgccggaaa
ctggaagttattaacctccgtaataatcgattttccggcgcggtctcacctgaattatcg
tcgctcctccgccttcgtatcctggatctttcttccaataagttctccggcgacttgagt
ttcttgaagtattttccaaaccttgaaaaactctctcttgctgataacatgtttaccgga
aaagtaccggcgtcgttacgttccttccgaaacctccggtttttcaacatctccggcaat
agtttcttggaaggcccgttgccggcgttaaaccaattggaatctccgttaccggagctg
aagacgaagaggaatactaactccaagcgtgttccaaaacgttatatcttcgctgaatca
acaaattcttcaagcaatcaaaacacaagctctaaccctaatgacttccaatctccggct
ccagctccggcgccggcagaacctccgatagggtcgcctccaaagcacaaacccaatcat
aaagccacaaagaaactgatgggttggattcttgggttttttgctggattattagcagga
attctttccgttatgatcttcacagttttcttcaaattggtttttattatgcttaaaggt
ggcgtaaaccaggtgggtccggcgatctttagtcaattaatcaaggcggaggagctcgct
tttcttgaaaatgacgacggaattgcgtcactgcaagtcatcggaagaggtggttgtgga
gaagtttacagaaccgatataccaaaaggaagaatcaaaacaatcgccattaaaaaggtc
acacaacctccaaaagatgctgcagagctcactgaagaagacaccaaattcctcaacaag
aaaatgcgtcaaatccgatcggaaatccaaaccgtcggccaaatccgccatcggaatctc
ctcccgttactcgcccacgtttcccgaccgaactgccattacctggtttacgaattcatg
aaaaacgggagcttgcaagacatcctcgaagaggctaacaacggcactcgagagttagac
tggctcgcacgtcacaagatcgcgatcgggatcgcatccgggctcgagtatcttcacata
caccacactccacgaatcgtccaccgagacctaaaacccggcaacgtgcttctcgacgac
gacatggaggctcgaatcgccgatttcggtctcgccaaatccataccggaagccgacact
cacatgacgagctccaacgttgcaggaaccctcggctacatcgcccccgaataccaccag
acgatgaaattcaccgacaaatgtgatatatacagcttcggggtgttgttaggagtgttg
gtgatgggaaagctcccgtccgacgagtttttccaacgcacgtcggaaatcagtctggta
aaatggatgaagaaggcgatcacttcggaagacccaaaacaagcgatcgatcccaatctg
ttcgagaacggatacgagaaacaaatgcttctggttctcaagatcgcatgtttctgtacg
ctggataacccgaaagaaaggccaagcagtaaggaatgtaggtccatgttggatcaaatc
cagcattga
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