Cynara cardunculus var. scolymus (artichoke): 112511654
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Entry
112511654 CDS
T05604
Name
(RefSeq) long chain base biosynthesis protein 2a-like isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00600
Sphingolipid metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112511654
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112511654
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
112511654
Amino acid related enzymes [BR:
ccav01007
]
Aminotransferase (transaminase)
Class II
112511654
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
112511654
NCBI-ProteinID:
XP_024973127
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Position
LG 4:17678186..17686486
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AA seq
489 aa
AA seq
DB search
MITVPYLTALTTYFSYGLLFAFGQLRDFFRRFIDWWKAGNLQGYAPICLGLEDFYIRRLY
LRIQDCFGRPISSPPDAWFDVVERISYDNNKTLKRTTKTSRCLNLGSYNYLGFAAADEYC
TPRVIECLKKYSASTCSTRVEGGTTALHCELEDVVANFVRKPAALVTGMGYVTNSAILPV
LIAKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEKVLRELIADGQPRTHRPWK
KIIVVVEGIYSMEGELCELPEIVSICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTA
DVDVMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHIYATSISPPSAEQILSAIKVILG
EDGSNRGAQKLAQIRENSNYFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLK
QKVAVVTVAFPATPLLLARARICISAAHSREDMVKALTVISNVGDLVGIKYFPAESKMPQ
VEEARAKVE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagttccttatttgacagcattgacaacctatttcagctacggattactcttc
gcttttggccaattgcgtgatttcttcagaagatttatcgattggtggaaagcaggcaat
cttcagggatatgcaccgatctgcttagggcttgaagacttttacatccgtcgtctctat
cttcgcattcaggattgttttggacggcctatatcgagccctcctgatgcttggtttgat
gtggtggagcgtatttcctatgataataacaagacactgaagcggactacaaaaactagt
aggtgccttaacttggggtcatacaattaccttggctttgctgcagcagatgaatattgc
acaccccgtgtaattgagtgtttgaagaaatactccgctagcacctgcagtactcgtgtt
gaaggaggcacaacagcattgcattgtgaattggaggacgtggtggctaattttgttagg
aaaccagctgctttagttactggcatgggctatgttactaactctgctatccttcctgtc
ttgattgcaaaaggaggcttgataattagtgattctctcaaccacaattctattgtcaat
ggtgctcgaggttcaggtgctaccattcgcgtattccaacataacacaccttctcatttg
gaaaaagtcttgagggaactcattgctgatggacaacctagaacacatagaccctggaaa
aagatcattgtggttgtagaggggatttacagcatggaaggggaactttgcgaacttcct
gagattgtttccatatgcaaaaaatataaggcatacgtctatttggatgaagctcacagt
attggtgcaattgggaaaacaggaagaggtgtctgcgagcttttaggcgtggataccgct
gatgtagatgtgatgatgggaactttcacaaaatcatttggatcatgcggtggttatata
gcaggatccaaggaactaattcaatatttgaagtacacttgccctgcacatatatatgcc
acgtcaatctcacctccttctgctgagcaaattttatctgccataaaggttattcttgga
gaggatggctctaatagaggggctcaaaagctcgcccaaattcgggaaaacagcaactat
tttaggtccgagctgcagaaaatggggtttgaggttctaggggataacgattcgcctgta
atgcctataatgctttataatcctgcaaaaattccggccttttcaagggagtgcctaaag
cagaaggtagcggttgtgacggttgcttttccagccacccctctattattagctcgagca
cgtatatgtatttctgctgctcattcaagggaggatatggtgaaagccttaacggttatt
agtaatgttggtgacctagtgggcataaaatactttccagccgagtcgaaaatgccgcaa
gtagaggaagctagagccaaagtcgagtag
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