Cynara cardunculus var. scolymus (artichoke): 112511983
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Entry
112511983 CDS
T05604
Name
(RefSeq) elongation factor 1-gamma 2-like
KO
K03233
elongation factor 1-gamma
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112511983
03012 Translation factors [BR:
ccav03012
]
112511983
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112511983
Translation factors [BR:
ccav03012
]
Eukaryotic type
Elongation factors
112511983
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EF1G
GST_N
GST_C
GST_N_2
GST_N_3
GST_C_3
GST_C_2
GST_N_5
Motif
Other DBs
NCBI-GeneID:
112511983
NCBI-ProteinID:
XP_024973515
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Position
LG 5:complement(25895456..25899566)
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AA seq
420 aa
AA seq
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MALVLHVGKNNKNAFKTLITAEYAGVEVKWADNFEMGVSNKAPEFLKMNPIGKVPVLETP
DGPVFESNAIARYVARLKTDTSLFGSSPIEYGQVEQWIDFSSFEIDSKLMGWLYPRFGYA
NYVAPVEEAFIDGLKRALGALNTYLASHTFLVGHGVTLADIIMTCNLYLGFKIMMTKSFT
SEFPHVERYFWTMINQPNVSKIIGEVEQTKAVPPIVSSKKPAQTKEVKPKVESKKVEKKE
APKPKIEDVQEEEEAPKPKPKNPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWDMF
DPEGYSLWFCNYKYNDENMVSFVTMNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKVKGL
WLFRGPLIPKFVMDECYDMELYEWTKVDISDEAQKERVNQMIEDYEPFEGEPLLDAKCFK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcactggtattgcatgtgggaaaaaacaacaagaatgctttcaagacactaattact
gctgaatatgctggtgttgaagttaaatgggctgataattttgagatgggcgtctcaaat
aaagctcctgagtttcttaaaatgaaccctattggaaaggttcctgtgctggagactcct
gatggtcctgtattcgagagtaatgccattgctcgctatgttgcccgcctgaagactgac
acttctctctttggatcttcaccaatagaatatggccaagttgagcagtggattgatttt
tcttcatttgagatcgattcgaaattgatgggatggctgtatccgagatttggttatgct
aactatgttgctccggttgaggaggcttttattgatggtttgaagagagctcttggtgct
ctgaacacatatcttgcctcgcatactttcttggttggtcatggcgtgactctagctgac
atcataatgacttgtaatttatacctaggcttcaaaatcatgatgactaaaagctttaca
tctgagtttcctcatgttgagaggtatttttggaccatgatcaatcaaccaaacgttagc
aaaataatcggtgaggtggagcagacaaaagctgtccctcctattgtttcttcaaaaaag
ccagctcaaacaaaagaggttaaaccaaaggttgagtccaaaaaggtagaaaagaaagaa
gctcctaagcccaagattgaagatgttcaggaggaagaagaggcaccaaagcctaagcca
aagaaccctcttgatctactgcccccaagtaagatgatcttggatgactggaagaggctt
tactccaacaccaaaaccaacttccgtgaggttgcaattaaaggtttctgggacatgttt
gatccagagggctactccctttggttttgtaattacaaatacaacgatgaaaacatggtc
tcatttgtgaccatgaacaaggtgggtggtttcctccaacgaatggatctagccaggaag
tacgcatttggaaagatgctgattattggatcagagcccccattcaaggtgaagggtttg
tggcttttccgtggcccattgatccccaagtttgtcatggacgagtgctatgatatggag
ctctacgagtggacaaaggtggatatctcggatgaagcacagaaggagcgcgtgaatcag
atgatcgaagattacgagccttttgaaggagagcctcttttggatgccaagtgcttcaag
tga
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