Cynara cardunculus var. scolymus (artichoke): 112512087
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Entry
112512087 CDS
T05604
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like
KO
K09264
MADS-box transcription factor, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112512087
Transcription factors [BR:
ccav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
112512087
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Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
PRIMA1
FliD_C
DUF3987
HAUS6_N
Motif
Other DBs
NCBI-GeneID:
112512087
NCBI-ProteinID:
XP_024973657
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Position
LG 5:complement(34898089..34908224)
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AA seq
254 aa
AA seq
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MGRGRVQLKRIENKISRQVTFSKRRTGLLKKAHEISVLCDADVALIVFSTKGKLFEYATH
SSMEAILERYERYSYAEKLLTAPETETQGSWTLESSKLRAKIEVLEKNIRHYVGEDLEPL
NLRELQSVEQQLETALKRIRTRKNQVMHESISELHKKERALQEQNNSLSKKLKANEKNGD
QRNAGFQLPQSQPPPPPPPPPPPPPPPPHHLAPLTFGSGSFQGAAVMRDDESIQAHTNMS
ASMMPPWLLRHINQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaagggtgcagttgaagaggatcgagaacaagattagcagacaggtgaca
ttctccaaaagaagaactgggttgttgaagaaagctcatgagatctctgtgttgtgtgat
gctgatgttgctctcattgttttctccactaaaggcaaactctttgagtacgccactcac
tccagtatggaggccattcttgaaaggtatgaacgatactcgtatgcagaaaagctgctt
actgcacctgaaacagaaacacagggaagctggactcttgagtcatcaaagctcagggct
aagattgaggtcctagaaaagaacataaggcactatgttggggaagatctcgagccgttg
aaccttcgagagcttcaaagtgtagaacaacaacttgagaccgctcttaaacgaattcga
acaaggaagaatcaagtcatgcatgagtccatctcagaacttcataaaaaggagagagca
ctgcaagagcaaaacaattcactctctaagaagttgaaggcgaatgagaagaacggtgac
caacgaaatgcagggtttcagttacctcagtctcagccaccaccaccaccaccgccaccg
ccaccgccgccaccaccaccaccacatcatttagctcctcttacattcgggagtggatcg
ttccaaggagcagcagtgatgagggatgatgaatcaattcaagctcatacgaacatgtct
gcttcgatgatgccgccatggctacttcgtcacattaaccaataa
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