Cynara cardunculus var. scolymus (artichoke): 112516952
Help
Entry
112516952 CDS
T05604
Name
(RefSeq) leucine-rich repeat extensin-like protein 4 isoform X1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_1
LRR_8
LRR_4
LRRNT_2
Motif
Other DBs
NCBI-GeneID:
112516952
NCBI-ProteinID:
XP_024979984
LinkDB
All DBs
Position
LG 8:1835780..1838640
Genome browser
AA seq
724 aa
AA seq
DB search
MKNISTHYFNLLYFFLVVVLLAFSTGNVFCFSDGGGGVGGSGPLTDGEVMYIRQRQLLYY
RDEFGDRGENVTVDSSLVFENPRLRNAYIALQAWKQAILSDPLNLTVDWVGSDVCDYTGV
FCAPAPDNRAERTVAGIDLNHGDIAGYLPEELGLLTDLALFHINSNRFCGTIPQKFRNLT
ILYELDISNNRFAGKFPYVVLKLPKLKFLDLRFNEFEGNVPKELFDKDLDAIFINHNRFK
FELPDNFGNSPVSVIVLANNKVHGCLPASIGNMSDTLNEIIMMNNGLRSCLPAEIGALNE
VTVFDVSFNELMGPLPESISGMVSVEQLNVAHNFLSGSIPESVCRLPRLENFTYSDNFFT
GEPPVCLNLAAFDDRRNCLPARPAQRSAKQCRMFASKNIHCSAFRCTPFVPALPSPPPPS
PPVPVPSPPVVTPSPPVVTPSPPPPPVYTPPSPSPPPPPPPSPPPPSPPPPSPPPPSPPP
PSPPPPVMSPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPSPPPPSPP
PPSPPPPEVTPPYCVRSPPPPPPAASPPPPPLYSPPPPIPYYYNSPPPPHSPPPPHSPPP
PPHSPPPPHSPPPPPTYIYSSPPPPPSPHSPPPPSPHSPPPPSPPPCIEPPPPPPPCIEY
TPPPPSPSPPPPPPIHHHSPPPVHHPSPPPIMYESPPPPAPAYEGPLPPVFGIPYASPPP
PPFY
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatctcaacgcattacttcaatctcttgtacttttttcttgttgttgtgttg
ttagcattttcaactggtaatgttttctgtttttccgatggcggcggcggtgttggtggt
tctggtccgcttaccgacggtgaggtgatgtatatccggcaacgtcagcttttgtactat
cgcgatgagttcggcgaccgtggagagaatgtgacggttgattcttctctggtttttgaa
aaccctaggctgagaaatgcttacattgctttacaagcatggaagcaagcgattctctca
gatccgcttaatctgaccgttgattgggttggatctgacgtatgcgactataccggagtg
ttttgtgctccggcgccggataatcgcgctgaaagaaccgtcgctggaatcgaccttaac
cacggcgacattgcaggttacttaccggaagaacttggacttcttactgatctggctttg
tttcacatcaattcgaaccggttttgcggaacgattccgcaaaagtttcgcaacttgacg
atactgtacgaacttgatatcagcaacaacaggttcgccggaaaatttccttatgttgtt
cttaaattgccgaaattaaagtttttagatctccggtttaatgagtttgaaggaaatgtt
ccgaaggaattatttgataaagatttggatgccattttcattaatcataaccggtttaaa
tttgagttgccggataatttcggcaattcgccggtgtcggttatcgttttggcgaataat
aaggttcacggctgtcttccggcgagcatagggaatatgtctgatactttgaatgagatt
attatgatgaataatggattacggtcgtgtttgccggcggaaattggggcgttgaatgag
gtgacggtgtttgatgtgagttttaacgagttgatgggaccgttgccggagagtatttcc
ggcatggtgagtgtggagcagttgaatgttgctcataatttcttgtcgggaagtataccg
gaaagtgtttgtcggttgccgaggttggagaattttacttattctgataatttctttacc
ggagagccgccggtgtgtttgaatttggcggcgtttgatgatcggagaaattgtttgccg
gcgaggccggcacaaaggtctgctaagcagtgcaggatgtttgcttctaagaacatacat
tgtagtgctttcaggtgtactccatttgttccggcgcttccctcaccaccaccgccgtct
cctcctgtgccggtgccgtcgccgcctgttgtgactccttcgccacctgttgtgactcca
tctcctccaccacctcctgtttacaccccaccctcaccgtctcctccacctccaccgcca
ccatcaccacctccaccatcaccacctccaccatcaccaccaccaccatctcccccacct
ccatctcctccgcctccggtaatgtcaccaccacctccaccaccctctccaccaccaccg
tcacctccacctccttctccaccaccaccgtcacctccacctccttctccaccaccaccg
tcacctccacctccttctccacctcccccatcaccatctccgcccccaccatcgccacca
ccaccatccccgccaccacctgaagtaactcctccttattgtgtaagatcacctccacca
cctcctccggctgcatctccaccgcctccacccttgtattccccaccaccacccattcct
tactactacaattcaccacctccaccacactctcctccgccaccccattcaccgcctcca
ccaccccattcacctccaccaccccattcacctccaccacctccgacatatatttattca
tcacccccaccgccaccatccccccattctccacctccaccatcgccacattctccacct
ccaccatcaccacctccttgtatagaacctccaccaccaccacctccttgcattgaatac
acaccaccacctccatcaccatcaccgcctccacctccaccaatccaccaccattcacca
cccccagtccatcatccttctccaccaccaatcatgtacgagagcccaccgcccccagct
ccggcatacgaaggaccactaccaccagtatttggcatcccgtacgcatctcctccacca
ccacccttctattga
DBGET
integrated database retrieval system
