Cynara cardunculus var. scolymus (artichoke): 112519094
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Entry
112519094 CDS
T05604
Name
(RefSeq) probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Malectin
LRR_1
LRR_8
LRR_4
Haspin_kinase
Malectin_like
Pkinase_fungal
Nodulin_late
Motif
Other DBs
NCBI-GeneID:
112519094
NCBI-ProteinID:
XP_024982836
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Position
LG 10:complement(4055784..4082768)
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AA seq
1010 aa
AA seq
DB search
MPLEKMMSKVGYVLFLALNLIILVRVSDSVVPEEEVEALQEIMELMGTTNWRLNGKSCQL
EVISEVQKPHPEADARVECDINCNNGNSSNCHVVSITHKYYSLGGVLPPDLVKLPHLHTI
DFAFNYLGGTIPSELGSIPLQSISLLGNRFSGEIPGELGNITTLTYLNLEANNFSGTVPS
ELGRLINLQALILSSNRLTGTLPASFAELRNLKDFRISDNNFSGSIPNFIQNWRQISKLE
MIGTGLQGPIPSNISLLQDLTDLRICEVSGSTQGFPSLDSATNLQTVVLRSCNISGEIPA
YIWQKRDLQLLDVSFNKLVGGISRNIVGRSLRFVFLTGNMLSGDIPDTLLIEGATIDLSY
NNFTWQGPDRPTCKPNMNLYLNLFRSSSTGNTLQDILPCTRDATCPKYGCSLHVNSGGDN
LRVNENNVEVLYEGDASFDGSAGSFHRSTNNWGLSSTGDFLDDYIQTNRYVESLQGTNLT
SLYTTARLCPLSLTYISYCLENGDYIVNLHFAEIQYTNDSTYLNLGRRIFDIYIQGQCVK
RDFNIEDEVGIRRPVVLPFNASVINNTLEIRFYWAGKGTTRLPKRGRYGPLISAISINPY
SKKCAIGGKTKKTNKIAYAGFALVGLCLLFIISAVLWWKRCSEDRKRNDKDFEGLEFKTT
SFSFKQLKTATCNFNATSKIGEGGFGPVFKGTLRDGTIIAVKQLSSRSRQGNREFLNEIG
MISCLQHPNLVKLHGCCMEGDQLLLVYEYLENNSLANVLFDSNQSRLLLDWPTRFKICVG
IARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLARLHEDENTHVSTRVAGTI
GYMAPEYALWGHLSDKADVYSFGVVALEIVSGKNNNRFIPNNDSVCLLDWACRLQNNKHY
EEIFDERLESKINREEAEIMVKVALMCTNGSPSMRPSMSEVVSMLEGRTCISDIEPEVSH
YFEDLRFKSMGGGHPTQSSLETQYSATIQSESCLSPSDHSEIVSGEPRSY
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgccacttgagaagatgatgagcaaagtagggtatgtgttgtttctagcactcaacttg
atcatactcgtaagagtttcagactctgtggttccagaggaagaagtcgaagctcttcaa
gaaattatggagttaatgggtacaacaaattggaggttgaatggtaaatcttgtcaactt
gaagtgatctctgaagtgcaaaagccccaccccgaagctgatgccagggtcgaatgtgac
attaactgtaacaatggcaactccagcaactgtcatgttgtaagcatcactcataagtat
tatagtcttggtggtgtccttccacccgacctcgtaaagcttcctcaccttcatactatt
gattttgcgttcaattaccttggtggcacgataccgtctgaattgggttcaataccgttg
cagtcaatctctcttcttggaaaccgtttttctggggaaataccaggggagctggggaat
attacaactttgacatatttgaaccttgaagcaaacaacttttctgggactgttccttct
gaactgggaagattaattaatctacaagcattgatcttgtcctcaaaccggttgacgggg
acgttgcctgcatcctttgctgaattgagaaatttgaaagattttaggataagtgacaac
aacttcagtgggtccatacctaacttcatacagaattggagacaaatcagtaaactagaa
atgattgggactgggctgcagggaccaattccttcaaacatatctcttcttcaggattta
acggatttgaggatttgtgaagtaagtgggtcaactcagggattcccttcgttagatagt
gctaccaatttacaaacagttgtattgagaagctgtaacatttccggagagatacctgct
tatatttggcaaaaaagagatcttcaattactggatgtcagctttaacaagttagttggg
ggaatatctcgtaacatcgtcggtaggagcttgcgtttcgtgtttttgactggcaacatg
ctaagtggagacataccggacacgcttttgatagaaggagctacaattgacctatcctac
aacaattttacatggcaagggcctgatcgacctacatgcaaaccaaacatgaatctatac
cttaacctgtttaggagttcttcaacggggaacacattacaggatatacttccatgcaca
agggatgccacatgtcctaaatatggatgttccttacatgttaacagtggcggagataat
ttgagggtaaatgaaaacaatgttgaagttctttatgaaggagatgcctcatttgatggc
agtgcaggaagttttcatagaagcactaataattggggacttagtagcaccggggacttc
ctggatgactatattcaaacaaaccgatatgtagaatctttgcagggaacgaacttaact
tctctttacacaacagcccgtctctgtccactatctcttacttatatcagctattgtttg
gaaaatggggattacattgttaatctgcactttgctgaaatacaatatactaatgacagt
acctacctaaatcttggcaggcggatatttgatatctatatccagggacaatgtgttaaa
agggacttcaatattgaagatgaggttgggataagaaggccggttgtattacccttcaat
gctagtgtcataaataacaccctagagatacgcttttactgggctggtaaagggacaaca
cgtttacccaagagaggacgttatgggcccctcatatcagctatatccattaacccatat
tctaagaaatgtgcaattggagggaagacaaagaagacaaacaaaattgcttatgctggt
tttgcactggtgggattgtgtcttctgttcataatctcggctgtcctatggtggaaaagg
tgttcagaagacagaaaaaggaatgataaagattttgaagggctggagttcaaaacaaca
tctttttcctttaaacaactaaaaactgctacatgcaacttcaatgctacaagcaaaata
ggagaaggtggcttcggaccagttttcaagggtacattacgtgatggcacaataattgct
gtgaagcagctttcctctcgttcgaggcaaggaaatcgtgaatttttaaacgagattggt
atgatatcttgtttacaacacccaaatctcgtgaagcttcatggatgctgtatggaagga
gatcaactattgctcgtatatgagtacctggaaaataatagcctcgcaaatgttctattt
gattcgaatcaaagtcgattactgttggattggccaacaaggtttaagatttgtgttggt
attgctagaggattagcttttcttcatgaagaatcgaggctcaaaattgtacatagggac
atcaaagctactaatgtcctgcttgataaagatctcaatcctaaaatatcggactttgga
ttggctaggctacatgaggatgagaacactcacgtcagcacacgagtggccggaacaata
ggatacatggcaccggaatatgcactttggggtcacctgagtgataaggcagatgtatac
agctttggagtcgtggctttggaaatcgtgagtggcaagaacaacaacagattcatacca
aataacgacagcgtttgtcttctagattgggcttgtcgtctgcaaaataataaacactac
gaggagatatttgacgagaggctggagtcgaaaatcaacagagaagaagcagaaatcatg
gttaaagtggcactaatgtgcacaaatggatctccttcaatgagacctagtatgtccgag
gtagtgagtatgttggaaggcagaacatgcatcagcgacatcgaaccagaagtaagccac
tattttgaagatttgagattcaaatcaatgggaggcggccatccgactcaaagtagcctt
gaaactcaatattctgctactattcagagcgaatcatgtctatctccaagcgatcattct
gaaattgtatcaggcgagccaagatcatactga
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