KEGG   Cynara cardunculus var. scolymus (artichoke): 112520367
Entry
112520367         CDS       T05604                                 
Name
(RefSeq) DNA-damage-repair/toleration protein DRT111, chloroplastic
  KO
K12840  splicing factor 45
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112520367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccav03041]
    112520367
Spliceosome [BR:ccav03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112520367
 Complex B
    112520367
SSDB
Motif
Pfam: G-patch RRM_1 EspB G-patch_2
Other DBs
NCBI-GeneID: 112520367
NCBI-ProteinID: XP_024984502
LinkDB
Position
LG 10:complement(14471766..14478539)
AA seq 379 aa
MLGGLYGDLPPPSSTDEDSHNRITTPSSNVWSSSVKMAPPTLRKPSSSSLIPPPKTLLKP
QQTKPRIVNSTAVTPPVPDRSSSFQPALVGVTSSVVEEYDPARPNDYEEYKRERKRKAAE
AEMKRELDRRRQEEEDRERRDREIMEKEREKDFNISGEEAWKRRAAMSVGGGGAVPRRSP
SPPSGGADGFSIEKSETGGLGVGAGGQMTAAQRMMAKMGWKAGQGLGKQEQGITTPLMAK
KTDRRAGVIVNASEPKQQPEKKPRGVNINGQPTRVVLLRNMVGPGEVDDDLETEVAEECA
KYGTVTRVLIFEITEPNFPVDEAVRIFVQFERSEQATKALVDLEGRFFGGRVVRATFYEE
ERFNTNELAPMPGEVPGFI
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgcttggtggattatatggagacttacctcctccatcatctacagatgaagattctcat
aatcgaatcaccactccctcctccaatgtatggtccagcagtgtcaagatggcaccgcca
actctccgcaagccctcttcctcttcactcatcccgcccccaaaaacccttttgaaaccc
cagcaaaccaaacctaggatagttaattccacggcagttacccccccggtgccggataga
agctcctctttccaaccggcacttgttggtgttacgtcgtcggtggttgaggaatacgac
cctgcgaggcccaatgattacgaggagtacaagagggaaaggaaaaggaaggctgctgag
gctgagatgaagagggaactcgacagaaggaggcaagaagaggaggacagggaaaggagg
gatagggaaattatggagaaagagagggagaaggactttaatatttccggtgaggaggct
tggaagaggcgtgctgctatgagtgttggtggtggtggtgctgtgccaaggaggtctcct
tcaccaccttctggtggtgctgatggatttagtatagaaaagtctgaaacaggtggtttg
ggtgttggtgctggtggacagatgactgctgcacaaaggatgatggctaaaatgggatgg
aaggcagggcaaggtcttggaaagcaggagcaggggattacaactccgttaatggcgaag
aagacggacaggcgagctggggttattgttaatgccagtgagcctaagcagcagccagaa
aagaagccaagaggtgtcaacatcaatggtcagcccacccgtgttgtgctcctacggaac
atggtgggtccaggtgaggtcgatgatgatctagaaaccgaggttgctgaggagtgcgca
aagtatgggacagtgacaagggtgttgatatttgagataacagagcctaactttccggtt
gatgaagcggttagaatttttgtgcagtttgagagatcagagcaagcaacgaaagcacta
gttgatcttgaaggtcggttttttgggggtagggttgtccgtgccactttctacgaggag
gagaggttcaataccaacgagttggctccgatgcctggggaagtcccgggttttatctag

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