Cynara cardunculus var. scolymus (artichoke): 112520826
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Entry
112520826 CDS
T05604
Name
(RefSeq) flowering time control protein FCA isoform X1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
WW
RRM_7
Motif
Other DBs
NCBI-GeneID:
112520826
NCBI-ProteinID:
XP_024985194
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Position
LG 11:complement(9821103..9840167)
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AA seq
860 aa
AA seq
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MDRHRGGGGDRYGNSPNDSHPYRHPRGGGTPSSRSSDDVTINRHRGGFSGNRRPFDNSPP
RYPLSGGGGGGGFRPMEGEGGFRPLGVRGARAYNNPSSEFEVPLSGQKRFNSDYEVPMSG
QKRQFPFVGRDGGSPPERFGGGNFENRNFDGDNFDKRHIDGGNFDKKHSEGGSFAKLFVG
SVPKTATEEDIRPAFEEHGNVVEVALIKDKRTGQQQGHTLFASAGCCFIKYATSEEADRA
IRALHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVEEIFLPYGRV
EDVYLMRDEMKQSRGCGFVKFSNRDVAMAAINALNGMYTMRGCEQPLIVRFADPKRPRPG
ETRGAPAFGGPGFGPRLQSPGIRPPNPGEAMHAPIPPNAWHPMNQQGMVPSSDIGMHGFG
SQAAPRSADGKGSSAPGGTHGGLGASSDNLFPGPAVPSTSTHQSFNSSLPQLSSGGHLSP
LKKPNQSPQDYPSSMQLQLQTPATFSQAPASSTVRPPGQLQAPNSASQASFSQGFPSQPM
LGFNGMLPLQQAQVQAGVSSTTTPSLSNNNLPPHVLTAMMNQYQLPGQQQMLQPVQQSAS
PLAQMLSQQKQTLQASYQSSQQAFSQLQQQLQLMQPSNPNLTPQQNLQGARLQQSTWGGS
LPQTSATSGASAVKPLTDSLPAASAASVASAMSSAGGSLKCNWTEHTSPDGYKYYYNSTT
GESKWEKPEELALYELQQKPQEQQQQQKQQQTATVQQPQSQSHSQGLPNQQTQIPQLQLQ
SHLQTQMQVQGRHPQQLQHAPQSSAYQNAGVAGHQNIQGFGYAQLPVGGGGSMNDSSRFQ
QGMQGAQDWMWKNKTAGPGS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggatagacatagaggaggaggaggagatcgatatggaaacagtcctaatgattctcac
ccttacagacaccctagaggtggaggtacaccatcgtcacgatcttcagatgatgttacc
atcaatcgtcaccgtggaggtttctccggaaatcgccgtccttttgacaatagtccacct
cgttatcctcttagtggtggcggcggcggtggaggttttcgcccgatggaaggggaaggt
ggtttccggcctttaggtgtgcgtggtgctagggcttacaacaatccttcttcagagttc
gaggtgcctctttcagggcagaaaaggttcaattctgattacgaggtgcctatgtcgggc
cagaaacgtcaattcccttttgttggccgagatggagggtctcccccagagcgatttggt
ggaggcaattttgagaacaggaactttgatggagataattttgacaaaagacacattgat
ggaggcaattttgacaaaaagcattctgaaggaggcagttttgccaagctttttgttggc
tcagttccgaagacggccactgaagaagacatccgacctgcttttgaagaacatgggaat
gtcgttgaggttgctttgatcaaagacaagagaacagggcagcaacaaggacacacgctg
ttcgcttctgcaggatgttgctttattaaatatgctacatcagaagaggctgatagggca
atacgtgccttacacaatcagtacacattgccagggggagtgggtcccatccaggttagg
tatgctgatggtgagcgtgagcgcttaggtgcagtggaatacaagctgtttgttggctcg
ttaaataaacaagcgactgagaaagaagttgaagaaatttttttgccttatggtcgagtt
gaggatgtctatctcatgcgcgacgaaatgaagcagagtcgtggatgtggatttgttaaa
ttttcaaatagagatgtggcaatggcggctataaatgctcttaatggaatgtacacaatg
cgaggttgtgaacaaccattgattgttcgatttgctgaccctaagagacccagaccagga
gaaacgaggggagctcctgcatttggtggtcctgggtttggtcctcggctgcagtcccct
gggattagaccaccaaatcctggtgaggctatgcacgctcctattcctccaaatgcatgg
catccgatgaaccagcagggcatggtaccatcttctgatattggcatgcatggttttggc
agtcaagcggctcctagatctgctgatgggaaagggtcttcagccccaggtggtacccat
ggtggccttggtgcctcttctgataatctgtttcctggacctgctgttccatccacgtca
acacatcagagctttaattcatctttgcctcaactctcatctggtggccatttgtcaccc
ttaaagaagccaaatcagtcaccacaggactacccttcgtctatgcagctacagctgcag
acacctgcaactttctcgcaggctccagcatctagtactgtaaggccacctgggcaacta
caagcacccaactctgctagtcaagcttccttcagtcaagggtttccatcgcagcctatg
cttggtttcaatgggatgttaccccttcagcaagcacaagtccaagctggtgtctcatca
acaacaacaccatctctttctaataacaacttaccaccccatgttctcaccgcaatgatg
aatcagtatcaactgccagggcagcagcaaatgcttcagcctgtgcagcaatcagcctct
ccgctggctcaaatgttgtctcagcaaaaacaaactttacaggcaagctatcaatcatct
cagcaagcattctctcagcttcaacaacaattgcagcttatgcaaccatcaaatccgaat
ttgacaccacaacagaatctccaaggtgcaagattgcagcagtctacatggggcggtagc
ttaccccagacatcagccacttctggtgcttcagctgtaaaacccttgacggattcactt
cctgctgcatctgctgcttcagttgcctcagccatgtcatctgctggaggttccttgaaa
tgtaattggaccgagcacacctctcctgatggatataagtactactacaacagcacaact
ggcgaaagcaaatgggagaaaccagaggaattggctctatatgaactacaacagaagcct
caagaacaacagcagcagcaaaagcaacaacaaacggcgaccgtacagcagcctcagagt
caatcccacagtcaaggtcttccaaatcagcaaactcagattccccaacttcagcttcaa
agtcaccttcaaacacagatgcaagtgcagggtcgacatcctcaacagttgcagcatgcc
cctcagtcatcagcgtatcaaaatgctggcgttgcaggtcatcaaaatattcagggcttt
ggctatgcacaattgccggtgggtggtggtggttctatgaatgattcttcacgctttcag
caggggatgcagggagcacaggactggatgtggaagaataaaacagcaggtccaggcagc
tga
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