Cynara cardunculus var. scolymus (artichoke): 112521657
Help
Entry
112521657 CDS
T05604
Name
(RefSeq) probable inactive receptor kinase At5g10020
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_1
LRR_4
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_6
LRRNT_2
Motif
Other DBs
NCBI-GeneID:
112521657
NCBI-ProteinID:
XP_024986411
LinkDB
All DBs
Position
LG 1:20532748..20537907
Genome browser
AA seq
1048 aa
AA seq
DB search
MRMRMRLLLLLFLWLFFSDVAASPEEVRALLEFKKGISEDPLGKVFDSWNVSSSDPASVC
PQFYGVSCDENGLVAAIVLDHLDLAGELKFFTLYSLKMLRNLSLSGNRLSGRLVPALGSM
YSLQYLDLSRNQFYGPIPARINDLYGLNHLNLSNNNFTGGFPNGIQNLQQLMVLDLHSNS
LWGDIGVLFSELRNVQFVDLSDNSFYGSLSMDVGNISSVVNTVQHVNLSRNRLSGSFLSA
DSLVLFRNLHVLDLGDNQLNGKLPSFGSLPNLQVLRLSNTQLFGPIPEELLESMIPLKEL
DLSRNGFSGSVPRINSSTLTTLNLSSNELSGSLPSSIGNCEIVDLSNNLLSGDISVIQEW
ESPIGILDLSSNKLFGNLPNLTSHFKGLTVLNVGNNSLKGSVPPFLISSPSLTLLDLSMN
ELDGSIPTALFTSMTLTHLDLSNNRFTGPIPLQGSQEKSLIVISSYPHMEFLDLSYNSLT
GTLSSDIGNFRRLRSLNLGNNELSGELPNELSKLGELEFLDLSDNSFKGKIPNSLSSLLK
FLNVSGNDLSGRIPENLKNFSDASFFPGNPSLRSAGGRPPSGGDFPSQAQDGAKGQNSKS
SIRIAIIVASVVAALMIAFVLLAYYRAQLGDFRVKTAFGGQMAGRDIKNGISSLPTTSLS
FSNAHLLTSNSRSVSGPSELGGDNVEPVVPPGYAASSTSMIPNLIDTDPAPSGRKSSPDS
PVASSPRFVETIEHAVTLDVYSPDRFAGQLFFFDPRSHLSFTAEDLSRAPAEILGRSSHG
TLYKATLGGGHMLTVKWLRVGLTKDKKEFAKEIKKIGTMIHPNVVRLLAYYWGPREQERL
TLANYIEGDSLALHLYETTPRRYSLLSFNQRLKVAVDVARGLSYLHGRGMPHGNLKPTNI
ILEGPQYDARLTDFSLHRLMTPAGIAEQILNLGALGYRAPELASAPRPVPSLKADVYAFG
VILMELLTRRSAGDIISGQSGAVDLTDWVRLCDQEGRGMDCIDRDIAGGEQQSKAMDDLL
EVSLRCILPLTERPNMRQILEDLCAISV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgcgaatgcgactgctgcttctcctgttcttgtggctcttcttctccgatgtg
gctgcgtcgccggaagaagtccgagcattactcgagttcaagaaggggatcagtgaagat
cccctcggaaaagtgtttgattcatggaacgtttccagctcggatccagcttctgtttgc
ccccaattttatggcgtgtcctgcgacgaaaacgggttagtcgccgccattgttcttgac
caccttgacttggccggcgaactcaagtttttcactctatattccttgaagatgctccgg
aatttgagtctttccggtaatagactcagtggccgccttgttccagctcttggatcaatg
tactctcttcaatatctggatctgtctcgaaaccaattttatggtccaattcctgctcgt
atcaacgatctctacgggctaaaccacctcaatttgtctaataacaatttcacaggaggg
tttccaaatgggattcagaatctgcagcaattgatggttctcgatttgcattcaaattcg
ttgtggggagatataggggttctgttttctgagcttagaaatgtgcaattcgttgactta
agcgacaattcgttttatgggtcgctatccatggatgtgggcaatatttctagcgtagtt
aatacagttcaacatgtcaatttgagtcgcaacagattgagtggttcgtttctcagtgct
gattctcttgttctctttaggaacctgcatgttctggatttgggggataatcagttgaat
gggaagttgccttcatttgggtcattgccaaatcttcaggtgttgaggctaagcaataca
cagttgtttggaccgatacccgaagaactcttggagagtatgattcctctaaaagagtta
gatctcagtcgtaatgggttttcaggttcggttccaagaatcaattcgtccactttgact
actttgaatctgtcatcaaatgagctatcaggttcattgccatcttctatcggaaattgc
gagattgtcgatttgagcaataatctactatctggtgacatctctgttattcaggaatgg
gaatcacctataggaattcttgatttgagctcaaataagttgttcgggaatttgcctaac
ttaacatcgcactttaagggactgactgttcttaatgtcggaaataactcgttaaaaggc
tctgtgcccccttttctgatatcgtcgcccagcctgactcttcttgacctcagcatgaat
gaactcgatgggtctattccgactgctttattcacttcgatgactttgacccatttggat
ctttcgaataaccgtttcacaggtccaattccacttcaagggtcacaagaaaaatcatta
atcgtaatatcctcgtatccacacatggagtttcttgatctctcgtataattccttaacg
ggcacattatcgtcagatataggcaacttcaggaggcttagatcgttgaatcttggaaat
aacgagttatccggcgaattgccgaatgaattgagcaaacttggtgaattggagtttctt
gatttatctgataatagcttcaagggtaagatcccaaacagcctttcttcattgctgaag
tttcttaatgtatccggtaacgatttatctgggcgaattcctgaaaacttgaaaaacttc
tcggatgcttcgttctttccgggaaacccgtccttgcggtcagctggcggtcggccgcct
tctggtggtgatttcccttcacaagctcaagatggagcaaaaggccaaaactcaaagtct
agcatcagaatagcgattatcgttgcttctgttgtagctgcattaatgatagcgtttgtg
ctactggcgtattatcgagcgcaacttggagatttccgtgttaaaactgcatttggtggc
cagatggccggtagggatattaagaacgggatatctagtctccccactacatcgctgagt
ttttcaaatgctcacttgctaacttcaaattcacgatcggtctcaggaccgtcggagctt
ggtggcgacaatgttgagccagtggtgccgccagggtatgccgctagttcaacatcaatg
atacccaacctgatcgataccgatcctgcaccatccggaaggaaatcttctccagattct
ccagttgcttcctcaccccgttttgttgagacaatcgaacacgctgtgacgttggacgtg
tattcaccggatcggtttgctgggcagctgttcttcttcgacccaaggtcgcacctatct
tttacagctgaagacctatcacgggctccagccgagattcttggaagaagcagccatgga
acactgtacaaagccaccctcggtggcggacatatgttaacggtaaagtggttgagggtc
ggattgacgaaagataaaaaggaatttgcaaaggagattaagaagatcggaacaatgatt
caccctaacgttgtgcgactactcgcgtattattggggcccgagagaacaagaaagactt
acgttggccaactacatcgagggagatagcttggctttacatctttatgagacaacccct
cgaagatactccttgctatcgtttaaccaacggttaaaagttgccgttgacgtcgctcga
ggcttatcgtaccttcatggaaggggcatgccacatggaaacctgaaaccaacaaatata
atcttggaaggccctcaatacgatgcccgtctcactgacttcagtctccaccgtctgatg
acgcctgccggcattgccgagcagatactcaaccttggcgcactcggctaccgtgcccct
gaactcgcatccgcacctcgacccgtcccatcactgaaagccgacgtgtatgcattcgga
gtcatcttgatggaacttctaaccagaagaagtgcaggtgacatcatttcaggtcaatct
ggtgcagtcgatttaactgattgggttcgattgtgtgatcaagaaggtcgagggatggat
tgtatcgatcgggacattgcggggggcgagcaacagtcgaaggccatggacgatttactc
gaagtatcgctcaggtgcatacttccattaacggaaaggccgaatatgagacaaatcttg
gaagatttatgtgccatatctgtttga
DBGET
integrated database retrieval system
