Cynara cardunculus var. scolymus (artichoke): 112522827
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Entry
112522827 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112522827
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Stress-antifung
ABC1
PRIMA1
Haspin_kinase
Pkinase_fungal
APH
TMEM154
M1E1E6-like
PalH
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
112522827
NCBI-ProteinID:
XP_024987907
LinkDB
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Position
LG 12:6302502..6310990
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AA seq
1335 aa
AA seq
DB search
MLFFIVIVINLFPLFVSQDIIYPTCDESANFTINGTYQRNLDNALLSLISDTSITYGFYN
RSVGETPDRVHVIALCRGDVDQDDCRRCINGSITRLREICPNQKGAIGWYDTCMLRYSNL
PIWGNPGSMDTRFQANPQNTSNVDQFNQGLYPLLDQLIVEASSGGSLRKYASNYTRGRGG
SRIFGIMQCTPDLSEFQCYNCLDRTIQLIPVCCDGRRGLRVLYPSCNLRYEDYSFFDEMV
VLPPPPWPQSPPRPSPQLLPPPPSPLGKTNNTSITVIAIVATLSLVILVVLFVFVFIRRK
RKLEGRPANNFVYEDVDINEISTTESLQYSFGIIREATNDFSESNKLGQGGFGSVYKGKL
QNGKEIAVKRLSKDSRQGEQEFKNEVLLLARLQHRNLVRLLGFSTEESERILIYEFVQNG
SLDQFIFNPMKRAALDWERRYKVIQGVARGLLYLHEDSRLKIIHRDLKASNVLLDAQMNP
KIADFGMARLFTCEESQGNTSQIAGTYGYMAPEYLTHGQFSVKSDVFSFGVLVLEIVMGQ
KNSSFQDEMVTEDLLSHAWKSWKAETTSSLIDPTLIMKDGPISLRDMIRCIHIGLLGVQE
DAIERPTMASVVLMLSSLSITLTFPSEPAFFLHTGMNPENPLFEEYASSTSNSSYSKNKS
KSSRGSIARDISLTSIVFHFVETMLMVIRVSISFFVVIIVNLFVLSVSQCNNDANFTSNG
AYQRNLDNALSTLTSNTTITYGFYNRSVGENPDKANVMALCRGDVERDDCRRCINDSRRR
LRESCPNQKGAMNLWSDGNCMVRYSNEPILGNPDINSPVIYMNPNNASGVDRFNQALNQL
LNQLRNNASSGGSSRKYASGTSTNGPWLTTIYGAMQCTPDLSEGQCENCLNSAMQQIPNC
CDGKLGVRVIYPSCDLRYENYSFFKATLALAPPPPPTELSPPSPPPSGIFSDKSSNTSII
IIIVVVATISLVILVATFVCIFKRRKKNIEGRLSQNLDVDVDKITTAESLQYSFAVIRAA
TDDFSENNKLGQGGFGSVYKGKLPNGQEIAVKRLSNNSGQGEQEFKNEVLLLARLRHRNL
VRLLGFSLEGSERLLMYEFLQNASLDQFIFDPVKRASLDWEJRYKIIHGVAKGLLYLHED
SRLKIIHRDMKASNVLLDVNMIAKIADFGMARLVTLEETQVNTSRIVGTYGYMAPEYALH
GQFSVKSDVFSFGVLVLEIVTGCKNHSFQNGTMVEDLLSHAWKSWRDGTISSLIDPTLKD
GSNSLRDMIRCIHIGLLCVQEDVTDRPTMASVVLMLGSLSLTLAVPSEPAFFIHTSKPEL
PLFEEYTSSTGSKVA
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttcatcgttattgtcataaatttatttccccttttcgtctcacaagatatt
atataccctacttgtgatgaaagcgcaaatttcactataaatggtacataccaaagaaat
cttgacaatgctttgttgtccctcatctctgatactagcattacatacggattctacaac
cggtccgttggagaaaccccagatcgagttcatgttatcgcgctatgtagaggtgatgtt
gatcaagacgattgtcgcaggtgcataaatggctctattacaagactaagagagatttgc
cctaaccaaaagggtgcaataggatggtatgatacgtgtatgctaaggtactctaatcta
cccatttggggaaatccaggcagtatggatacacggttccaggcaaaccctcagaacacg
tcaaacgtggaccaatttaatcaagggctttatccgttgttggatcaattaatagttgag
gcatctagtggtgggtctctccgtaaatatgcttccaactatacacgtggtcgtgggggc
tcaaggatctttgggatcatgcagtgtacaccggatttgtctgaattccaatgttataat
tgcttggatcgtacaatccaactcattccagtttgttgtgatggcagacgtggactaaga
gttctatatcctagttgcaacctaaggtatgaagattacagtttctttgatgaaatggtg
gttcttcccccaccaccatggccgcaatctcctccacgaccatcgccacaattgcttcca
ccgccaccatcgccattaggcaagactaacaacacgtctataactgtaattgctatcgtt
gcaacccttagtcttgtgatattggtcgtgcttttcgttttcgtcttcataagaagaaaa
agaaagctcgaaggacgacctgcaaataattttgtttacgaggacgtagatatcaatgaa
attagtacaaccgaatctttgcagtatagctttggtatcattagagaagcaacaaatgac
ttctcagagagcaataagcttggacaaggtggatttggttcggtttacaagggaaagtta
cagaatggaaaagaaatagcagtgaagaggttgtcgaaggattcaagacaaggcgaacaa
gaatttaagaacgaggtcctgttacttgcaaggctccaacatcgaaacctggttcgtctc
ctaggtttcagcacagaagagtctgaacgaatcttgatatatgagtttgtacaaaatgga
agtctagaccaatttatatttaatccaatgaagcgtgcagctctagattgggaaagacga
tacaaagtaatacaaggtgttgcaaggggacttctatacttacatgaggattcacgatta
aagataattcatcgagatttgaaagctagtaatgttctgttggatgcccaaatgaatccg
aaaattgcagattttggtatggcaaggttattcacatgtgaagaatcccaaggcaacact
agtcaaattgccggaacctatggctacatggcacccgagtatttaacgcatggacaattt
tcggtaaaatcagatgtctttagtttcggtgtactagtactcgagatagtaatgggtcaa
aagaacagtagtttccaagacgaaatggtgacagaggatcttctaagccatgcatggaaa
agttggaaagcggaaacgacttcaagtttaattgatcctacactcatcatgaaagatggt
cctatttccttacgtgatatgataagatgtatccatattggcttattaggtgttcaagaa
gacgctatcgagagaccaactatggcttcagttgttctcatgcttagtagcctctctata
accctcacgttcccttcagagcctgcttttttcttgcatacaggtatgaatccagaaaac
cccctatttgaagagtacgcttcaagcacaagtaattctagctattcaaaaaataaatcc
aaatcttcacggggatctatagcacgtgatatttctttaacatccatagttttccatttt
gttgagaccatgttgatggtaatccgagtgtcgatttcgttttttgttgttattatcgta
aatttattcgtgctttcggtctctcaatgcaacaatgacgcgaacttcacttcaaacggt
gcgtatcaaagaaatcttgacaatgctttgtcgaccctcacctctaataccactatcaca
tacggcttctataaccggtctgttggtgaaaaccccgataaagccaacgtgatggcgtta
tgtagaggtgatgttgagcgagatgattgtcgcaggtgcataaatgactctagaagaaga
ctaagagagagttgtcctaaccaaaagggtgcaatgaatctatggtcggatgggaattgt
atggtgaggtactctaatgaacccattttgggaaatccagacattaatagtccggttatc
tacatgaaccctaacaacgcgtcgggcgtggatcggtttaatcaagcgctcaaccagctg
ttgaaccaactaagaaataatgcttcgagtggtgggtctagtcgtaaatatgcttccggg
accagcacaaatggcccttggttgacaaccatctatggggccatgcagtgcacacccgat
ttatccgagggtcagtgtgaaaattgcttgaatagtgcaatgcaacaaatcccaaattgt
tgtgatggaaaacttggagtaagagttatatatcctagctgcgatctcaggtatgaaaat
tactcgttttttaaagctacactggctcttgcaccaccaccaccgccaacggagttgtct
ccaccatcgccgccaccatcaggtatattttcagacaaaagtagtaacacgtctataata
atcatcattgtcgtcgttgcaaccattagtcttgtgatattggtagcgactttcgtttgc
atattcaagagaagaaaaaagaacatcgaaggacggctgtcgcagaatctagacgtagac
gttgataaaattactacagccgaatcgttgcaatatagctttgctgtcattagagcagca
acagatgacttttcagagaacaataagcttggacaaggtggatttggttctgtttataag
ggtaagttaccaaatgggcaagaaatagcagtgaagaggttgtcgaataactcgggacaa
ggtgaacaagaattcaagaacgaggttttgttacttgcaaggctccgacatcggaatttg
gttcgtctcctagggtttagcctcgaagggtctgaacgacttttgatgtatgagtttcta
caaaatgcaagtctagatcaatttatattcgatccagtgaaacgtgcaagtctagattgg
gaawtacgatacaaaataatacatggtgttgcaaagggacttctatatctacacgaggat
tcacggctaaagattattcatcgggatatgaaagctagtaacgttttactggatgtcaat
atgattgctaaaattgcggattttggtatggcaaggttggtcacgcttgaagaaacacaa
gtcaacactagtcgaatcgtcggaacctatggatacatggcaccagagtatgcattgcat
ggacaattttcagttaaatcagatgtttttagcttcggtgtattagtactcgaaatagta
accggttgtaagaaccatagtttccaaaatgggacgatggtggaggatcttcttagccat
gcatggaaaagttggagagatggaacgatttcaagtttaattgatcctacactaaaagat
ggttcaaattccctgcgtgatatgatcagatgcatccacattggcctactatgtgttcaa
gaagacgttactgatagaccaactatggcttcagtagttctcatgcttggtagtctctct
ctaacgctcgccgtcccttcagagcctgcttttttcatccatacgagcaagccagaacta
cccctattcgaagagtacacttcaagtacaggttccaaggtcgcataa
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